Return to main results Retrieve Phyre Job Id

Job DescriptionP75713
Confidence99.62%DateThu Jan 5 12:13:23 GMT 2012
Rank34Aligned Residues166
% Identity13%Templatec3myxA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein pspto_0244; PDBTitle: crystal structure of a pspto_0244 (protein with unknown function which2 belongs to pfam duf861 family) from pseudomonas syringae pv. tomato3 str. dc3000 at 1.30 a resolution
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  IETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYE
Query Conservation   

   

 
   
   
    
  

    
 
  
   
 
      
 
        
  
    
    
      
Alig confidence 







































..





































Template Conservation   

   



   

  
       

   

 
    
 ..     
                
  
     
 

  
Template Sequence  YTEXLVXHRGSVTLTSGTDSVTLSTGESAVIGRGTQVRID. . AQPESLWAFCASTQASGPDKSGITALDRLALLTPSSPP
Template Known Secondary structure  SSTTTT

TT

..
TT
S

S



S
TT





Template Predicted Secondary structure 












..

























Template SS confidence 















































































   64.....70.........80.........90.........100... ......110.........120.........130.........140.
 
   161........170.........180.........190.........200.........210..... ....220.........230...
Predicted Secondary structure  ......




























.








Query SS confidence  . . . . . .






















































.

















Query Sequence  . . . . . . GMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNL. DNNWIPVKKGDYIFMGAY
Query Conservation  ......
      
 


 
             

        
  
    

 
 
    .         

 
   
 
Alig confidence  ......

































..


















.

















Template Conservation   
       
  
         
    


  


     ..     
   



 
 

   
      


    
 
Template Sequence  DPSIXISPLPQCRSNNLFEDTASTLRIGVWDSTPYERISR. . PHKIHELXNLIEGRVVLSLENGSSLTVNTGDTVFVAQG
Template Known Secondary structure 
GGGBSS




SSSS


B

..
SS


TTS

TT

TT
Template Predicted Secondary structure 

















..















Template SS confidence 















































































   142.......150.........160.........170.........180. ........190.........200.........210.........
 
   234.....240.........250.
Predicted Secondary structure 






Query SS confidence 

















Query Sequence  SLQAGYGVGRGEAFSYIY
Query Conservation   

     
      
  
Alig confidence 











.




Template Conservation    
 
 
 
 

.
 


Template Sequence  APCKWTSTGYVR. KFYAV
Template Known Secondary structure 
SS
.
Template Predicted Secondary structure 



.
Template SS confidence 

















   220.........230. .....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions