Job Description P75713 Confidence 99.67% Date Thu Jan 5 12:13:23 GMT 2012 Rank 28 Aligned Residues 197 % Identity 14% Template c3kscD_ PDB info PDB header:plant protein Chain: D: PDB Molecule:lega class; PDBTitle: crystal structure of pea prolegumin, an 11s seed globulin2 from pisum sativum l. Resolution 2.61 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.											.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	F	V	D	Y	L	V	T	L	H	Q	N	G	G	N	Q	Q	G	F	G	G	E	G	I	E	T	F	L	Y	V	I	S	G	N	I	T	A	K	A	.	.	.	.	.	.	.	.	.	.	E	G	K	T	F	A	L	S	E	G	G	Y	L	Y	C	P	P	G	S	L	M	T	F	V	N	A	Q	A	E	D
Query Conservation																																										.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.
Template Sequence		A	G	V	A	L	S	R	A	T	L	Q	R	N	A	.	.	L	R	R	P	Y	Y	S	N	A	P	Q	E	I	F	I	Q	Q	G	N	G	Y	F	G	M	V	F	P	G	C	P	E	T	D	R	H	Q	K	V	N	R	F	R	E	G	D	I	I	A	V	P	T	G	I	V	F	W	M	Y	N	D	Q	D	T	P
Template Known Secondary structure			T										T	T		.	.								S	S																		T	T															T	T							T	T									S	S	S
Template Predicted Secondary structure																.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	I	F	L	Y	K	R	R	Y	V	P	V	E	G	Y	A	P	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	A	V	S	L	T	D	I	R	S	S	N	N	Q	L	D	Q	M	P	R	R	F	Y	L	A	G	N	H	E	Q	E	F	L	Q	Y	Q	H	E	G	N	N	I	F	S	G	F	K	R	D	F	L	E	D	A	F	N	V	N	R	H	I	V	D	R	L	Q	G	R	N	E	D	E	E	K	G	A	I	V	K
Template Known Secondary structure										T	T	S	T	T			S		S	S						S	S	S	S				T	T	G	G	G						S	G	G	G	G	S										T										T	T	T	T			T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
															146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	S	G	N	A	S	E	L	E	R	I	H	Y	E	G	M	D	D	V	I	L	L	D	F	L	P	K	E	L	G	F	.	.	.	.	D	M	N	M	H	I	L	S	F	A	P	G	A	S	H	G	Y	I	E	T	H	V	Q	E	H	G	A	Y	I	L	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template Conservation
Template Sequence		V	K	G	G	L	S	I	I	T	V	C	T	A	K	L	R	L	N	I	G	P	S	S	S	P	D	I	Y	N	P	E	A	G	R	I	K	T	V	T	S	L	D	L	P	V	L	R	W	L	K	L	S	A	E	H	G	S	L	H	K	N	A	M	F	V	P	H	Y	N	L	N	A	N	S	I	I	Y	A	L	K
Template Known Secondary structure			S	S								S	S	S							S	T	T	S			S				T	T	T								T	T	T		T	T					T										T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		209	210	.	.	.	.	.					.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.						.	.
Query SS confidence									.	.	.	.						.	.
Query Sequence		G	Q	G	V	Y	N	L	.	.	.	.	D	N	N	W	I	.	.	P	V	K	K	G	D	Y	I	F	M	G	A	Y	S	L	Q	A	G	Y	G	V	G	R	G	E	A	F	S	Y	I	Y	S	K	D	C	N	R
Query Conservation									.	.	.	.						.	.
Alig confidence									.	.	.	.						.	.																	.						.
Template Conservation																																				.						.
Template Sequence		G	R	A	R	L	Q	V	V	N	C	N	G	N	T	V	F	D	G	E	L	E	A	G	R	A	L	T	V	P	Q	N	Y	A	V	.	A	A	K	S	L	.	S	D	R	F	S	Y	V	A	F	K	T	N	D	R
Template Known Secondary structure		S									T	T	S										T	T							T	T				.						.	S	S									S	S	T	T
Template Predicted Secondary structure																																				.						.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions