Job Description P75713 Confidence 99.68% Date Thu Jan 5 12:13:23 GMT 2012 Rank 26 Aligned Residues 197 % Identity 13% Template c3kglB_ PDB info PDB header:plant protein Chain: B: PDB Molecule:cruciferin; PDBTitle: crystal structure of procruciferin, 11s globulin from2 brassica napus Resolution 2.98 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.										.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.
Query Sequence		A	S	F	V	D	Y	L	V	T	L	H	Q	N	G	G	N	Q	Q	G	F	G	G	E	G	I	E	T	F	L	Y	V	I	S	G	N	I	T	A	K	A	.	.	.	.	.	.	.	.	.	E	G	K	T	F	A	L	S	E	G	G	Y	L	Y	C	P	P	G	S	L	M	T	F	V	N	A	Q	A	E	D	S
Query Conservation																																										.	.	.	.	.	.	.	.	.
Alig confidence																.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																.	.
Template Sequence		S	G	V	S	F	V	R	Y	I	I	E	S	K	G	.	.	L	Y	L	P	S	F	F	S	T	A	K	L	S	F	V	A	K	G	E	G	L	M	G	R	V	V	P	G	C	A	E	D	M	H	Q	K	V	E	H	I	R	T	G	D	T	I	A	T	H	P	G	V	A	Q	W	F	Y	N	D	G	N	Q	P	L
Template Known Secondary structure			T										T	T		.	.								S	S									S									S	S	S						S							T	T							T	T									S	S	S
Template Predicted Secondary structure																.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	F	L	Y	K	R	R	Y	V	P	V	E	G	Y	A	P	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	V	S	V	L	D	L	A	S	H	Q	N	Q	L	D	R	N	P	R	P	F	Y	L	A	G	N	N	P	Q	G	Q	V	W	I	E	G	R	E	Q	Q	P	Q	K	N	I	L	N	G	F	T	P	E	V	L	A	K	A	F	K	I	D	V	R	T	A	Q	Q	L	Q	N	Q	Q	D	N	R	G	N	I	I
Template Known Secondary structure									S	S	S	T	T			S		S	S						S	S			B	T	T			T	T	S	T	T			S			B			G	G	G	G	S										T									T	T	T	T	T			S		S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
																							146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	S	G	N	A	S	E	L	E	R	I	H	Y	E	G	M	D	D	V	I	L	L	D	F	L	P	K	E	L	G	F	.	.	.	.	D	M	N	M	H	I	L	S	F	A	P	G	A	S	H	G	Y	I	E	T	H	V	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template Conservation
Template Sequence		R	V	Q	G	P	F	S	V	I	R	P	P	L	R	S	E	T	I	C	S	A	R	C	T	D	N	L	D	D	P	S	N	A	D	V	Y	K	P	Q	L	G	Y	I	S	T	L	N	S	Y	D	L	P	I	L	R	F	L	R	L	S	A	L	R	G	S	I	R	Q	N	A	M	V	L	P	Q	W	N	A	N	A
Template Known Secondary structure				S	S				S	S				S						S	S							S	S		G	G	G		S				T	T	T								T	T	T		T	T					T										T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.						.	.
Query SS confidence																	.	.	.	.						.	.
Query Sequence		E	H	G	A	Y	I	L	S	G	Q	G	V	Y	N	L	.	.	.	.	D	N	N	W	I	.	.	P	V	K	K	G	D	Y	I	F	M	G	A	Y	S	L	Q	A	G	Y	G	V	G	R	G	E	A	F	S	Y	I	Y	S	K	D	C	N	R
Query Conservation																	.	.	.	.						.	.
Alig confidence																	.	.	.	.						.	.																	.						.
Template Conservation																																												.						.
Template Sequence		N	A	V	L	Y	V	T	D	G	E	A	H	V	Q	V	V	N	D	N	G	D	R	V	F	D	G	Q	V	S	Q	G	Q	L	L	S	I	P	Q	G	F	S	V	.	V	K	R	A	T	.	S	E	Q	F	R	W	I	E	F	K	T	N	A	N
Template Known Secondary structure										S									T	T	S										T	T							T	T				.						.	S	S									S	S	T	T
Template Predicted Secondary structure																																												.						.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions