Job Description P75713 Confidence 96.51% Date Thu Jan 5 12:13:23 GMT 2012 Rank 125 Aligned Residues 79 % Identity 9% Template c3gbgA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395 Resolution 1.90 Å

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																		.																									.	.
Query SS confidence																		.																									.	.
Query Sequence		D	M	N	M	H	I	L	S	F	A	P	G	A	S	H	G	.	Y	I	E	T	H	V	Q	E	H	G	A	Y	I	L	S	G	Q	G	V	Y	N	L	D	N	.	.	N	W	I	P	V	K	K	G	D	Y	I	F	M	G	A	Y	S	L	Q	A	G	Y	G	V	G	R	G	E	A	F	S	Y	I	Y	S	K	D
Query Conservation																		.																									.	.
Alig confidence																		.																									.	.
Template Conservation
Template Sequence		S	F	Q	T	N	V	Y	R	M	S	K	F	D	T	Y	I	F	N	N	L	Y	I	N	D	Y	K	M	F	W	I	D	S	G	I	A	K	L	I	D	K	N	C	L	V	S	Y	E	I	N	S	S	S	I	I	L	L	K	K	N	S	I	Q	R	F	S	L	T	S	L	S	D	E	N	I	N	V	S	V	I	T
Template Known Secondary structure		T										T	T											S	S							S	S	S							T	T	T	T							T	T							T	T												S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		255	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		86	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions