 |
Job Description | P75713 | Confidence | 62.85% | Date | Thu Jan 5 12:13:23 GMT 2012 |
Rank | 159 | Aligned Residues | 73 |
% Identity | 18% | Template | c3dkqB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:pkhd-type hydroxylase sbal_3634; |
PDBTitle: crystal structure of putative oxygenase (yp_001051978.1) from2 shewanella baltica os155 at 2.26 a resolution
|
Resolution | 2.26 Å |
|
 |
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 210 | . | . | . | . | . | . | . | |
|
. | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . |  |
|  |  |  |  |  |  |
|
| . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | M | H | I | L | S | F | A | P | G | A | S | H | G | Y | I | E | T | H | V | Q | E | H | G | A | Y | I | L | . |
. |
. |
. |
. |
. |
. |
S | G | Q | G | V | Y | N | L | D | N | . |
. |
N | W | I | P | V | K | K | G | D | Y | I | F | M | G | A | Y | S | L | Q | A | G | Y | G | V | G | R | G | E | A | F | S | Y |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
| . | . | . | . | . | . | . |   |
|   |
|   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
Template Conservation |   |
|   |   |   |
|   |
|
|   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |
|   |
|   |
|
|
|   |
|   | . | . |
|   |
Template Sequence |   |
Y | P | P | L | F | N | R | Y | Q | G | G | E | T | F | G | Y | H | I | D | R | T | D | L | S | A | T | L | F | L | S | E | P | E | N | Y | Q | G | G | E | L | V | I | Q | D | T | Y | G | Q | Q | S | I | K | L | S | A | G | S | L | V | L | Y | P | S | S | S | L | H | Q | V | T | P | V | L | S | G | E | . |
. |
R | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
| S |
| G | G | G |  |  |  |
|
|  |  |  |  |
| S | S |
|  |  |  |  |
|
|
| T | T |
|  |  |  |  |  | T | T | S |
|  |  |  |
|
|  |  |  |  |
| . | . |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  | . | . |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
|
. | . |
  |
  |   |
250 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
I | Y | S | K |
Query Conservation |   |
  |   |   |   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |   |   |
Template Sequence |   |
A | A | F | X |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
169 | 170 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|