Return to main results Retrieve Phyre Job Id

Job DescriptionP75713
Confidence55.00%DateThu Jan 5 12:13:23 GMT 2012
Rank163Aligned Residues75
% Identity15%Templatec3bvcA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein ism_01780; PDBTitle: crystal structure of uncharacterized protein ism_01780 from2 roseovarius nubinhibens ism
Resolution2.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   180.........190.........200. ...... ..210....... ..220.........230.
Predicted Secondary structure 














.....


.......................




Query SS confidence 





















. .





. . .









. . . . . . . . . . . . . . . . . . . . . . .













Query Sequence  NMHILSFAPGASHGYIETHVQE. . HGAYIL. . . SGQGVYNLDN. . . . . . . . . . . . . . . . . . . . . . . NWIPVKKGDYIFMG
Query Conservation          

        
  
..    

... 
 
      .......................       

 
   
Alig confidence 













.






..





...









.......................













Template Conservation    
 

   
    . 
 
     





  
       
  
                        
 
  
 




Template Sequence  DLWINILPEGGSHA. SHIHPHSVISGTTYVSMPGGTSALKLEDPRHAMMMAAPARRKTARDELRQFIYVTPAVGDVLLWE
Template Known Secondary structure 
TT

.

TT
SS


SS

S
TTGGGGSSS



TT

GGG
S


TT
Template Predicted Secondary structure 







.










































Template SS confidence 















































































   104.....110....... ..120.........130.........140.........150.........160.........170.........180..
 
   232.......240.........250......
Predicted Secondary structure 












Query SS confidence 
























Query Sequence  AYSLQAGYGVGRGEAFSYIYSKDCN
Query Conservation 
  

     
      
       
Alig confidence 














.








Template Conservation 
 
 
 
 
  

  .






  
Template Sequence  SWLRHEVPMNMSEDD. RISVSFNYR
Template Known Secondary structure  TT




SSS
.
Template Predicted Secondary structure 








.

Template SS confidence 
























   183......190....... ..200......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions