Job Description P75713 Confidence 99.64% Date Thu Jan 5 12:13:23 GMT 2012 Rank 32 Aligned Residues 197 % Identity 16% Template c2e9qA_ PDB info PDB header:plant protein Chain: A: PDB Molecule:11s globulin subunit beta; PDBTitle: recombinant pro-11s globulin of pumpkin Resolution 2.20 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	F	V	D	Y	L	V	T	L	H	Q	N	G	G	N	Q	Q	G	F	G	G	E	G	I	E	T	F	L	Y	V	I	S	G	N	I	T	A	K	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	T	F	A	L	S	E	G	G	Y	L	Y	C	P	P	G	S	L	M
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.
Template Sequence		A	G	V	N	M	I	R	H	T	I	R	P	K	G	.	.	L	L	L	P	G	F	S	N	A	P	K	L	I	F	V	A	Q	G	F	G	I	R	G	I	A	I	P	G	C	A	E	T	Y	Q	T	D	L	R	A	F	K	D	Q	H	Q	K	I	R	P	F	R	E	G	D	L	L	V	V	P	A	G	V	S	H
Template Known Secondary structure			T										T	T		.	.								S	S																		T	T																								T	T							T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	F	V	N	A	Q	A	E	D	S	Q	I	F	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	M	Y	N	R	G	Q	S	D	L	V	L	I	V	F	A	D	T	R	N	V	A	N	Q	I	D	P	Y	L	R	K	F	Y	L	A	G	R	P	E	Q	V	E	R	G	V	E	E	K	S	G	N	I	F	S	G	F	A	D	E	F	L	E	E	A	F	Q	I	D	G	G	L	V	R	K	L	K	G	E	D	D
Template Known Secondary structure							S	S	S										S	S	S	T	T			S		S	S						S	S	S						S	S	T	T							T	T	T	T	S										T											T	T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
												133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	K	R	R	Y	V	P	V	E	G	Y	A	P	W	L	V	S	G	N	A	S	E	L	E	R	I	H	Y	E	G	M	D	D	V	I	L	L	D	F	L	P	K	E	L	G	F	.	.	.	.	D	M	N	M	H	I	L	S	F	A	P	G	A	S	H	G	Y	I	E	T	H
Query Conservation		.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template Conservation
Template Sequence		E	R	D	R	I	V	Q	V	D	E	D	F	E	V	L	L	P	E	T	I	C	T	L	R	L	K	Q	N	I	G	R	S	E	R	A	D	V	F	N	P	R	G	G	R	I	S	T	A	N	Y	H	T	L	P	I	L	R	Q	V	R	L	S	A	E	R	G	V	L	Y	S	N	A	M	V	A	P	H	Y	T	V
Template Known Secondary structure			S	T	T						S	S			T	T	T	T			G	G	G	S							S	T	T	S			S				T	T	T								T	T	T	S	T	T					T										T	T									S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.						.	.
Query SS confidence																			.	.	.	.						.	.
Query Sequence		V	Q	E	H	G	A	Y	I	L	S	G	Q	G	V	Y	N	L	.	.	.	.	D	N	N	W	I	.	.	P	V	K	K	G	D	Y	I	F	M	G	A	Y	S	L	Q	A	G	Y	G	V	G	R	G	E	A	F	S	Y	I	Y	S	K	D	C	N	R
Query Conservation																			.	.	.	.						.	.
Alig confidence																			.	.	.	.						.	.																					.	.
Template Conservation																																																		.	.
Template Sequence		N	S	H	S	V	M	Y	A	T	R	G	N	A	R	V	Q	V	V	D	N	F	G	Q	S	V	F	D	G	E	V	R	E	G	Q	V	L	M	I	P	Q	N	F	V	V	I	K	R	A	.	.	S	D	R	G	F	E	W	I	A	F	K	T	N	D	N
Template Known Secondary structure		S																			T	T	S										T	T							T	T								.	.												S	S	S	S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions