Job Description P75713 Confidence 99.37% Date Thu Jan 5 12:13:23 GMT 2012 Rank 55 Aligned Residues 96 % Identity 10% Template c1y9qA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, hth_3 family; PDBTitle: crystal structure of hth_3 family transcriptional regulator2 from vibrio cholerae Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	F	E	N	C	D	A	T	I	L	S	T	P	K	L	G	A	S	F	V	D	Y	L	V	T	L	H	Q	N	G	G	N	Q	Q	G	F	G	G	E	G	I	E	T	F	L	Y	V	I	S	G	N	I	T	A	K	A	E	G	K	T	F	A	L	S	E	G	G	Y	L	Y	C	P	P	G	S	L	M	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	D	L	N	X	K	I	H	T	L	F	P	Y	A	A	D	T	G	L	E	I	F	E	I	T	L	L	D	H	H	Q	Q	X	S	S	P	H	A	L	G	V	I	E	Y	I	H	V	L	E	G	I	X	K	V	F	F	D	E	Q	W	H	E	L	Q	Q	G	E	H	I	R	F	F	S	D	Q	P	H	G	Y
Template Known Secondary structure		T	T		T	T											T	T	T	T										T	T									S	T	T										S							T	T							T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	A	Q	A	E	D	S	Q	I	F	L	Y	K	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	V	T	E	K	A	V	F	Q	N	I	V	A	Y	P
Template Known Secondary structure				S	S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions