Job Description P75713 Confidence 99.56% Date Thu Jan 5 12:13:23 GMT 2012 Rank 44 Aligned Residues 203 % Identity 18% Template c1uijA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:beta subunit of beta conglycinin; PDBTitle: crystal structure of soybean beta-conglycinin beta2 homotrimer (i122m/k124w) Resolution 2.50 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.
Predicted Secondary structure																																										.	.	.	.																													.
Query SS confidence																																										.	.	.	.																													.
Query Sequence		A	S	F	V	D	Y	L	V	T	L	H	Q	N	G	G	N	Q	Q	G	F	G	G	E	G	I	E	T	F	L	Y	V	I	S	G	N	I	T	A	K	A	.	.	.	.	E	G	K	T	F	A	L	S	E	G	G	Y	L	Y	C	P	P	G	S	L	M	T	F	V	N	A	Q	A	.	E	D	S	Q	I	F	L
Query Conservation																																										.	.	.	.																													.
Alig confidence																.	.																									.	.	.	.																													.
Template Conservation																.	.
Template Sequence		R	D	Y	R	I	V	Q	F	Q	S	K	P	N	T	.	.	I	L	L	P	H	H	A	D	A	D	F	L	L	F	V	L	S	G	R	A	I	L	T	L	V	N	N	D	D	R	D	S	Y	N	L	H	P	G	D	A	Q	R	I	P	A	G	T	T	Y	Y	L	V	N	P	H	D	H	Q	N	L	K	M	I	W
Template Known Secondary structure		T	T										T	T		.	.								S										S									S	S									T	T							T	T										S	S
Template Predicted Secondary structure																.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	K	R	R	Y	V	P	V	E	G	Y	A	P	W	L	V	S	G	N	A	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	I	P	V	N	K	P	G	R	Y	D	D	F	F	L	S	S	T	Q	A	Q	Q	S	Y	L	Q	G	F	S	H	N	I	L	E	T	S	F	H	S	E	F	E	E	I	N	R	V	L	F	G	E	E	E	E	Q	R	Q	Q	E	G	V	I	V	E	L	S	K	E	Q	I	R	Q	L	S	R	R	A	K	S
Template Known Secondary structure						S	S	B	T	T	B						S	S		B	S	S				G	G	G	G	S										T	S										T		T	T		G	G	G	S	B	S	S	S													T	S	S		B
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
																	154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	R	I	H	Y	E	G	M	D	D	V	I	L	L	D	F	L	P	K	E	L	G	F	.	.	.	.	D	M	N	M	H	I	L	S	F	A	P	G	A	S	H	G	Y	I	E	T	H	V	Q	E	H	G	A	Y	I	L	S	G	Q	G	V	Y	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation
Template Sequence		S	S	R	K	T	I	S	S	E	D	E	P	F	N	L	R	S	R	N	P	I	Y	S	N	N	F	G	K	F	F	E	I	T	P	E	K	N	P	Q	L	R	D	L	D	I	F	L	S	S	V	D	I	N	E	G	A	L	L	L	P	H	F	N	S	K	A	I	V	I	L	V	I	N	E	G	D	A	N	I	E
Template Known Secondary structure				G	G	G	G	G		S	S	S				T	T	S	S			S				S	S								T	T	T								T										T	T									S	S										S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		215				.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure			.	.	.					.	.	.	.
Query SS confidence			.	.	.					.	.	.	.
Query Sequence		L	.	.	.	D	N	N	W	.	.	.	.	I	P	V	K	K	G	D	Y	I	F	M	G	A	Y	S	L	Q	A	G	Y	G	V	G	R	G	E	A	F	S	Y	I	Y	S	K	D	C	N	R	D	V	E	I
Query Conservation			.	.	.					.	.	.	.
Alig confidence			.	.	.					.	.	.	.
Template Conservation
Template Sequence		L	V	G	I	K	L	E	V	Q	R	Y	R	A	E	L	S	E	D	D	V	F	V	I	P	A	A	Y	P	F	V	V	N	A	T	S	N	L	N	F	L	A	F	G	I	N	A	E	N	N	Q	R	N	F	L
Template Known Secondary structure																		T	T							T	T								S	S	S									T		T	T						S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions