 |
Job Description | P33232 | Confidence | 21.71% | Date | Thu Jan 5 11:51:32 GMT 2012 |
Rank | 484 | Aligned Residues | 71 |
% Identity | 18% | Template | d3bula2 |
SCOP info | Flavodoxin-like
| Cobalamin (vitamin B12)-binding domain
| Cobalamin (vitamin B12)-binding domain
|
Resolution | 2.30 |
|
 |
  |   |
253 | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | |
|
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
I | L | D | P | E | D | A | R | D | A | V | R | F | G | A | D | G | I | V | V | S | N | H | G | G | R | Q | L | D | G | V | L | S | S | A | R | A | L | P | A | I | A | D | A | V | K | G | D | I | A | I | L | A | D | S | G | I | R | N | G | L | D | V | V | R | M | I | A | . |
. |
. |
L | G | A | D | T | V | L |
Query Conservation |   |
|   |   |   |
|
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|
|   |
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |
|
|   |
|
|
|
|
|   |
|   |
|
|   |
|
|
|
| . | . | . |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
| . | . | . | . |
|   |   |
|   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
Template Sequence |   |
V | P | A | E | K | I | L | R | T | A | K | E | V | N | A | D | L | I | G | L | S | G | L | I | T | P | S | L | D | E | M | V | N | V | A | K | E | M | . |
. |
. |
. |
E | R | Q | G | F | T | I | P | L | L | I | G | G | A | T | T | S | K | A | H | T | A | V | K | I | E | Q | N | Y | S | G | P | T | V | Y | V |
Template Known Secondary structure |   |
B |
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
|
| S | T |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  | T | T |
|
| S |
|  |  |  |  | S | T | T |
|
|  |  |  |  |  |  |  | T | G | G | G |
| S | S |
|  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
784 | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | |
|
|
|
. | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|