Job Description P33232 Confidence 99.43% Date Thu Jan 5 11:51:32 GMT 2012 Rank 59 Aligned Residues 201 % Identity 18% Template d1xm3a_ SCOP info TIM beta/alpha-barrel ThiG-like ThiG-like Resolution 1.80

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	F	N	E	K	L	S	M	P	V	A	L	A	P	V	G	L	C	G	M	Y	A	R	R	G	E	V	Q	A	A	K	A	A	D	A	H	G	I	P	F	T	L	S	T	V	S	V	C	P	I	E	E	V	A	P	A	I	K	R	P	M	W	F	Q	L	Y	V	L	R	D	R	G	F	M	R	N	A	L	E
Query Conservation
Alig confidence																	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		T	I	G	G	K	S	F	Q	S	R	L	L	L	G	T	.	.	.	.	.	G	K	Y	P	S	F	D	I	Q	K	E	A	V	A	V	S	E	S	D	I	L	T	F	A	V	R	R	X	N	I	F	L	E	Q	L	D	L	S	K	Y	T	L	L	P	N	T	A	G	A	S	T	A	E	E	A	V	R	I	A	R
Template Known Secondary structure				T	T				S								.	.	.	.	.	S		S	S													T		S						T	T	S	S	T	T			T	T			G	G	G	S							T	T		S	S
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.						20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		143	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		R	A	.	K	A	A	G	C	S	T	L	V	F	T	V	D	M	P	T	P	G	A	R	Y	R	D	A	H	S	G	M	S	G	P	N	A	A	M	R	R	Y	L	Q	A	V	T	H	P	Q	W	A	W	D	V	G	L	N	G	R	P	H	D	L	G	N	I	S	A	Y	L	G	K	P	T	G	L	E	D	Y	I
Query Conservation				.
Alig confidence				.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	K	A	S	G	L	C	D	X	I	K	V	E	V	I	G	C	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T			S	S						B			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	L	G	N	N	F	D	P	S	I	S	W	K	D	L	E	W	I	R	D	F	W	D	G	P	M	V	I	K	G	I	L	D	P	E	D	A	R	D	A	V	R	F	G	A	D	G	I	V	V	S	N	H	G	G	R	Q	L	D	G	V	L	S	S	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I
Query Conservation
Alig confidence		.	.																					.																																	.																					.	.
Template Conservation		.	.																					.																																	.																					.	.
Template Sequence		.	.	R	S	L	L	P	D	P	V	E	T	L	K	A	S	E	Q	L	L	E	E	.	G	F	I	V	L	P	Y	T	S	D	D	V	V	L	A	R	K	L	E	E	L	G	V	H	A	I	X	P	G	A	S	P	.	I	G	S	G	Q	G	I	L	N	P	L	N	L	S	F	I	I	E	Q	A	.	.	K	V
Template Known Secondary structure		.	.	T	T			B															T	.	T									S												T		S		B				S	S	S	.	T	T						S													.	.	S	S
Template Predicted Secondary structure		.	.																					.																																	.																					.	.
Template SS confidence
				106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	L	A	D	S	G	I	R	N	G	L	D	V	V	R	M	I	A	L	G	A	D	T	V	L	L	G	R	A	F	L	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	I	V	D	A	G	I	G	S	P	K	D	A	A	Y	A	X	E	L	G	A	D	G	V	L	L	N	T	A	V	S	G	A
Template Known Secondary structure			B				S				S										T	T		S					S					T	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions