Return to main results Retrieve Phyre Job Id

Job DescriptionP33232
Confidence99.26%DateThu Jan 5 11:51:32 GMT 2012
Rank72Aligned Residues172
% Identity17%Templated1vc4a_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   139140.........150.........160.........170.........180.........190.........200.........210........
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  NALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLE
Query Conservation   

  
   
  

  


    
 
  
                     
                             
Alig confidence 






























.










































.....
Template Conservation    
      

 






   
 

   
 . 

  
 



 





  

  
   


 



   
   .....
Template Sequence  EAALAYARGGARAVSVLTEPHRFGGSLLDLK. RVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLGEL. . . . .
Template Known Secondary structure  TT
S


SSS


.

S
S


STT
SGGG.....
Template Predicted Secondary structure 











.


















.....
Template SS confidence 















































































   6970.........80.........90......... 100.........110.........120.........130.........140..
 
   219220.........230.........240.........250.........260.........270.........280.........290........
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  DYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVK
Query Conservation                    
  

     






   


  
   


 
 






 

    
   
  
  

 
Alig confidence  ..............










..




















































Template Conservation  ..............
 

   
  
..

  



    
   
   

  







 
   
      
   
    
Template Sequence  . . . . . . . . . . . . . . TGAYLEEARRL. . GLEALVEVHTERELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRG
Template Known Secondary structure  ................T

ST
SSB
TTT

B
TTTT
Template Predicted Secondary structure  ..............
..



















Template SS confidence 















































































   143......150... ......160.........170.........180.........190.........200......
 
   299300.........310.........320.........330...
Predicted Secondary structure 












Query SS confidence 


































Query Sequence  GDIAILADSGIRNGLDVVRMIALGADTVLLGRAFL
Query Conservation    
 

 




 
 

 






 

 



 
Alig confidence 















.

















Template Conservation      






 
 

.
  
  











Template Sequence  FGGVLVAESGYSRKEE. LKALEGLFDAVLIGTSLM
Template Known Secondary structure 

SS


S.TTTTT
S
Template Predicted Secondary structure 







.



Template SS confidence 


































   207..210.........220.. .......230.........240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions