Job Description P33232 Confidence 100.00% Date Thu Jan 5 11:51:32 GMT 2012 Rank 32 Aligned Residues 325 % Identity 15% Template d1tv5a1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.40

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	L	P	P	F	L	F	H	Y	M	D	G	G	A	Y	S	E	Y	T	L	R	R	N	V	E	D	L	S	E	V	A	L	R	Q	R	I	L	K	N	M	S	D	L	S	L	E	T	T	L	F	N	E	K	L	S	M	P	V	A	L	A	P	V	G	L	C	G	M	Y	A	R	R	G	E	V	Q	A	A	K
Query Conservation
Alig confidence															.	.	.	.													.							.																											.	.	.	.	.									.	.
Template Conservation															.	.	.	.													.							.																											.	.	.	.	.									.	.
Template Sequence		D	I	F	L	K	F	C	L	K	Y	I	D	G	.	.	.	.	E	I	C	H	D	L	F	L	L	L	G	K	.	Y	N	I	L	P	Y	.	D	T	S	N	D	S	I	Y	A	C	T	N	I	K	H	L	D	F	I	N	P	F	G	V	A	A	.	.	.	.	.	G	F	D	K	N	G	V	C	.	.	I	D
Template Known Secondary structure												S			.	.	.	.													.	T	T		S			.			S				G	G	G					T	T				S	S	S					T	.	.	.	.	.	T	T	T	T	T		S	S	.	.
Template Predicted Secondary structure															.	.	.	.													.							.																											.	.	.	.	.									.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.			.	.
		95	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		A	A	D	A	H	G	I	P	F	T	.	L	S	T	V	S	V	C	P	I	E	E	V	A	P	A	I	K	R	P	M	W	F	Q	L	Y	V	L	R	D	R	G	F	M	R	N	A	L	E	R	A	K	A	A	G	C	S	T	L	V	F	T	V	D	M	P	T	P	G	A	R	Y	R	D	A	H	S	G	M	S
Query Conservation												.
Alig confidence												.									.	.	.	.																.	.	.	.	.	.
Template Conservation																					.	.	.	.																.	.	.	.	.	.
Template Sequence		S	I	L	K	L	G	F	S	F	I	E	I	G	T	I	T	P	R	G	.	.	.	.	Q	T	G	N	A	K	P	R	I	F	R	D	V	E	S	.	.	.	.	.	.	R	S	I	I	N	S	C	G	F	N	N	M	G	C	D	K	V	T	E	N	L	I	L	F	R	K	R	Q	E	E	D	K	L	L	S	K
Template Known Secondary structure					T	T	T		S									S	S		.	.	.	.	B			S		S							T	T	T	.	.	.	.	.	.	T								S		B	S																				S	T	T	T	T
Template Predicted Secondary structure																					.	.	.	.																.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.	.	.	.	.	.							270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		174	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																		.	.	.	.
Query SS confidence										.	.	.	.																																		.	.	.	.
Query Sequence		G	P	N	A	A	M	R	R	.	.	.	.	Y	L	Q	A	V	T	H	P	Q	W	A	W	D	V	G	L	N	G	R	P	H	D	L	G	N	I	S	A	Y	L	G	K	P	.	.	.	.	T	G	L	E	D	Y	I	G	W	L	G	N	N	F	D	P	S	I	S	W	K	D	L	E	W	I	R	D	F	W	D
Query Conservation										.	.	.	.																																		.	.	.	.
Alig confidence										.	.	.	.																																		.	.	.	.
Template Conservation
Template Sequence		H	I	V	G	V	S	I	G	K	N	K	D	T	V	N	I	V	D	D	L	K	Y	C	I	N	K	I	G	R	Y	A	D	Y	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N	I	I	L	S	V	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K
Template Known Secondary structure												T	T		S														G	G	G		S									T	T	S	T	T	G	G	G	G	G	S																								S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		246	.	.	.	250	.							.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.									.	.	.	.	.	280	.	.	.	.	.								.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																								.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.																								.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Query Sequence		G	P	M	V	I	K	.	.	.	.	.	.	G	I	L	D	P	E	D	A	R	D	A	V	R	F	G	A	D	G	I	V	V	S	N	.	.	.	.	.	.	.	.	H	G	G	R	Q	L	D	G	V	L	S	.	.	.	.	.	.	.	S	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I	A	I	L
Query Conservation								.	.	.	.	.	.																								.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																								.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	V	F	V	K	L	A	P	D	L	N	Q	E	Q	K	K	E	I	A	D	V	L	L	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P	I	I
Template Known Secondary structure										S																	T	T		S								B	S						G	G	G	T	T			S																						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	S	G	I	R	N	G	L	D	V	V	R	M	I	A	L	G	A	D	T	V	L	L	G	R	A	F	L	Y	A	L	A	T	A	G	Q	A	G	V	A	N	L	L	N	L	I	E	K	E	M	K	V	A	M	T	L	T	G	A	K	S	I	S	E	I
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.
Template Sequence		A	S	G	G	I	F	S	G	L	D	A	L	E	K	I	E	A	G	A	S	V	C	Q	L	Y	S	C	L	V	F	.	.	.	.	.	.	.	.	N	G	M	K	S	A	V	Q	I	K	R	E	L	N	H	L	L	Y	Q	R	G	Y	Y	N	L	K	E	A
Template Known Secondary structure				S	S			S										T	T							S						.	.	.	.	.	.	.	.		G	G	G																	T		S	S	S	G	G	G
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.									.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions