Job Description P33232 Confidence 100.00% Date Thu Jan 5 11:51:32 GMT 2012 Rank 4 Aligned Residues 351 % Identity 36% Template d1p4ca_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.35

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	A	A	S	D	Y	R	A	A	A	Q	R	I	L	P	P	F	L	F	H	Y	M	D	G	G	A	Y	S	E	Y	T	L	R	R	N	V	E	D	L	S	E	V	A	L	R	Q	R	I	L	K	N	M	S	D	L	S	L	E	T	T	L	F	N	E	K	L	S	M	P	V	A	L	A	P	V	G	L	C	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	N	V	E	D	Y	R	K	L	A	Q	K	R	L	P	K	M	V	Y	D	Y	L	E	G	G	A	E	D	E	Y	G	V	K	H	N	R	D	V	F	Q	Q	W	R	F	K	P	K	R	L	V	D	V	S	R	R	S	L	Q	A	E	V	L	G	K	R	Q	S	M	P	L	L	I	G	P	T	G	L	N	G
Template Known Secondary structure			S	S												S												S	T	T										G	G	G	G								S				S	S		B						T	T				S	S	S							S		G	G
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	A	R	R	G	E	V	Q	A	A	K	A	A	D	A	H	G	I	P	F	T	L	S	T	V	S	V	C	P	I	E	E	V	A	P	A	I	K	R	P	M	W	F	Q	L	Y	V	L	R	D	R	G	F	M	R	N	A	L	E	R	A	K	A	A	G	C	S	T	L	V	F	T	V	D	M	P	T	P	G
Query Conservation
Alig confidence																																																			.
Template Conservation																																																			.
Template Sequence		A	L	W	P	K	G	D	L	A	L	A	R	A	A	T	K	A	G	I	P	F	V	L	S	T	A	S	N	M	S	I	E	D	L	A	R	Q	C	D	G	D	L	W	F	Q	L	Y	V	I	.	H	R	E	I	A	Q	G	M	V	L	K	A	L	H	T	G	Y	T	T	L	V	L	T	T	D	V	A	V	N	G
Template Known Secondary structure		G	T	S	T	T													T							T	T		S	S											S									S	.	S														T	T									S		S	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	Y	R	D	A	H	S	G	M	S	G	P	N	A	A	M	R	R	Y	L	Q	A	V	T	H	P	Q	W	A	W	D	V	G	L	N	G	R	P	H	D	L	G	N	I	S	A	Y	L	G	K	P	T	G	L	E	D	Y	I	G	W	L	G	N	N	F	D	P	S	I	S	W	K	D	L	E	W	I	R	D
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	E	R	D	L	H	N	R	F	K	I	P	P	F	L	T	L	K	N	F	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	L	G	K	M	D	K	A	N	L	E	M	Q	A	A	L	M	S	R	Q	M	D	A	S	F	N	W	E	A	L	R	W	L	R	D
Template Known Secondary structure										T					T	T				G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S			S	S	T	T	T	T	T					T	S	S				T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.																						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	W	D	G	P	M	V	I	K	G	I	L	D	P	E	D	A	R	D	A	V	R	F	G	A	D	G	I	V	V	S	N	H	G	G	R	Q	L	D	G	V	L	S	S	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I	A	I	L	A	D	S	G	I	R	N	G	L	D	V	V	R	M	I	A	L	G
Query Conservation
Alig confidence																																																									.	.
Template Conservation																																																									.	.
Template Sequence		L	W	P	H	K	L	L	V	K	G	L	L	S	A	E	D	A	D	R	C	I	A	E	G	A	D	G	V	I	L	S	N	H	G	G	R	Q	L	D	C	A	I	S	P	M	E	V	L	A	Q	S	V	A	K	T	.	.	G	K	P	V	L	I	D	S	G	F	R	R	G	S	D	I	V	K	A	L	A	L	G
Template Known Secondary structure					S																			T	T		S							G	G	G	T	S		T	T				G	G	G	T									.	.		S						S	S			S										T	T
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	T	V	L	L	G	R	A	F	L	Y	A	L	A	T	A	G	Q	A	G	V	A	N	L	L	N	L	I	E	K	E	M	K	V	A	M	T	L	T	G	A	K	S	I	S	E	I	T	Q	D	S	L	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	A	V	L	L	G	R	A	T	L	Y	G	L	A	A	R	G	E	T	G	V	D	E	V	L	T	L	L	K	A	D	I	D	R	T	L	A	Q	I	G	C	P	D	I	T	S	L	S	P	D	Y	L	Q	N
Template Known Secondary structure			S					S																																		T			B	G	G	G			G	G	G
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions