Job Description P33232 Confidence 100.00% Date Thu Jan 5 11:51:32 GMT 2012 Rank 11 Aligned Residues 283 % Identity 24% Template d1p0ka_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.90

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		40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure															.	.																											.
Query SS confidence															.	.																											.
Query Sequence		E	D	L	S	E	V	A	L	R	Q	R	I	L	.	.	K	N	M	S	D	L	S	L	E	T	T	L	F	N	E	K	L	S	M	P	V	A	L	A	P	V	.	G	L	C	G	M	Y	A	R	R	G	E	V	Q	A	A	K	A	A	D	A	H	G	I	P	F	T	L	S	T	V	S	V	C	P	I	E	E	V
Query Conservation															.	.																											.
Alig confidence															.	.																											.																																						.
Template Conservation																																																																																	.
Template Sequence		T	G	L	D	D	I	T	F	V	H	V	S	L	P	D	L	A	L	E	Q	V	D	I	S	T	K	I	G	E	L	S	S	S	S	P	I	F	I	N	A	M	T	G	G	G	G	K	L	T	Y	E	I	N	K	S	L	A	R	A	A	S	Q	A	G	I	P	L	A	V	G	S	Q	M	S	A	L	K	D	P	.
Template Known Secondary structure			S	G	G	G							S						G	G	G		B						T	T				S		S									S																				T									T	T	T	T	T			.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	A	I	K	R	P	M	W	F	Q	L	Y	V	L	R	D	R	G	F	M	R	N	A	L	E	R	A	K	A	A	G	C	S	T	L	V	F	T	V	D	M	P	T	P	G	A	R	Y	R	D	A	H	S	G	M	S	G	P	N	A	A	M	R	R	Y	L	Q	A	V	T	H	P	Q	W	A	W	D	V	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	R	L	S	Y	E	I	V	R	K	E	N	P	N	G	L	.	.	I	F	A	N	L	G	S	E	A	T	A	A	Q	A	K	E	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														S	S	S		.	.							T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																									.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		L	N	G	R	P	H	D	L	G	N	I	S	A	Y	L	G	K	P	T	G	L	E	D	Y	I	G	W	L	G	N	N	F	D	P	S	I	S	W	K	D	L	E	W	I	R	D	F	W	D	G	P	M	V	I	K	G	I	.	.	.	L	D	P	E	D	A	R	D	A	V	R	F	G	A	D	G	I	V	V	S
Query Conservation																																																											.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																		.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template Sequence		G	A	N	A	L	Q	I	H	L	N	V	I	Q	E	I	F	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	K	R	I	E	Q	I	C	S	R	V	S	V	P	V	I	V	K	E	V	G	F	G	M	S	K	A	S	A	G	K	L	Y	E	A	G	A	A	A	V	.	.	.
Template Known Secondary structure		T		S								T	T	T	T			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	S								S	S														T		S			.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.					.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		N	H	G	G	R	Q	L	D	G	.	.	.	.	V	L	S	S	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I	A	I	L	A	D	S	G	I	R	N	G	L	D	V	V	R	M	I	A	L	G	A	D	T	V	L	L	G	R	A	F	L	Y	A	L	A	T	A	G	Q	A	G	V	A	N	L	L	N
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																.
Template Conservation																														.
Template Sequence		D	I	G	G	R	Q	I	S	F	F	N	S	W	G	I	S	T	A	A	S	L	A	E	I	R	S	E	F	.	P	A	S	T	M	I	A	S	G	G	L	Q	D	A	L	D	V	A	K	A	I	A	L	G	A	S	C	T	G	M	A	G	H	F	L	K	A	L	T	D	S	G	E	E	G	L	L	E	E	I	Q
Template Known Secondary structure								G	G	G	G	T	T		S															.	T	T	S						S	S			S										T	T		S
Template Predicted Secondary structure																														.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	I	E	K	E	M	K	V	A	M	T	L	T	G	A	K	S	I	S	E	I	T	Q	.	D	S	L	V	Q	G	L	G	K	E	L	P	A	A	L
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		L	I	L	E	E	L	K	L	I	M	T	V	L	G	A	R	T	I	A	D	L	Q	K	A	P	L	V	I	K	G	E	T	H	H	W	L	T	E	R
Template Known Secondary structure															T			B					T	T																T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions