Job Description P33232 Confidence 98.51% Date Thu Jan 5 11:51:32 GMT 2012 Rank 112 Aligned Residues 207 % Identity 14% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.	.	160											.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	D	R	G	F	M	R	N	A	L	E	R	A	K	A	A	G	C	S	T	L	V	F	T	.	.	.	.	.	.	.	V	D	M	P	T	.	.	.	.	.	.	.	.	.	.	P	G	A	R	Y	R	D	A	H	S	G	M	S	G	P	N	A	A	M	R	R	Y	L	Q	A	V	T	H	P	Q	W	A	W
Query Conservation																											.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	P	N	L	Q	T	S	E	A	F	L	Q	R	L	D	Q	S	P	I	D	I	L	E	L	G	V	A	Y	S	D	P	I	A	D	G	E	I	I	A	D	A	A	K	I	A	L	D	Q	G	V	D	I	H	S	V	F	E	L	L	A	R	I	K	T	K	K	A	L	V	F	X	V	Y	Y	N	L	I	F	S	Y
Template Known Secondary structure		S	S											T	G	G	G	S	S		S								S	S					S	S													T	T												T				S	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	G	L	N	G	R	P	H	D	L	G	N	I	S	A	Y	L	G	K	P	T	G	L	E	D	Y	I	G	W	L	G	N	N	F	D	P	S	I	S	W	K	D	L	E	W	I	R	D	F	W	D	G	P	M	V	I	K	G	I	L	D	P	E	D	A	R	D	A	V	R	F	G	A	D	G	I	V	V	S
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.							.	.
Template Sequence		G	L	E	K	F	V	K	K	A	K	S	L	G	I	C	A	L	I	V	P	E	L	S	F	E	E	S	D	D	L	I	.	.	.	.	.	.	.	.	.	.	K	E	C	E	R	Y	.	.	N	I	A	L	I	T	L	V	S	V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K	G	F	I	Y	L	L
Template Known Secondary structure													T	T							T	T			G	G	G						.	.	.	.	.	.	.	.	.	.							.	.	T									T	T	S										T	T			S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.							.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.											.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		N	H	G	G	R	Q	L	D	G	V	L	S	S	A	R	A	L	P	A	I	A	D	A	V	K	G	.	.	D	I	A	I	L	A	D	S	G	I	R	N	G	L	D	V	V	R	M	I	A	L	G	A	D	T	V	L	L	G	R	A	F	L	Y	A	L	A	T	A	G	Q	A	G	V	A	N	L	L	N	L	I
Query Conservation																												.	.
Alig confidence															.													.	.																	.
Template Conservation															.																															.
Template Sequence		A	S	I	G	I	T	G	T	K	S	V	E	E	.	A	I	L	Q	D	K	V	K	E	I	R	S	F	T	N	L	P	I	F	V	G	F	G	I	Q	N	N	Q	D	V	.	K	R	X	R	K	V	A	D	G	V	I	V	G	T	S	I	V	K	C	F	K	Q	G	N	L	D	I	I	X	K	D	I	E	E	I
Template Known Secondary structure				S		S	S								.												T	T			S						S	S			S	S				.				T	T	T	S	S												T	T	S	S												T
Template Predicted Secondary structure															.																															.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions