Job Description P33232 Confidence 94.83% Date Thu Jan 5 11:51:32 GMT 2012 Rank 227 Aligned Residues 176 % Identity 11% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	M	R	N	A	L	E	R	A	K	A	A	G	C	S	T	L	V	F	T	V	D	M	P	T	P	G	A	R	Y	R	D	A	H	S	G	M	S	G	P	N	A	A	M	R	R	Y	L	Q	A	V	T	H	P	Q	W	A	W	D	V	G	L	N	G	R	P	H	D	L	G	N	I	S	A	Y	L	G	K	P
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	C	A	H	Y	V	E	V	T	R	K	L	G	I	P	Y	I	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	F	D	K	P	R	S	S	I	H	S	Y	R	G	V	G	L	E	E	G	L	K	I	F	E	K	V	K	A	E	F	G	I	P	V	I	T	D	V	H	E	P
Template Known Secondary structure															T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S			T	T	S		T	T	S				S																										S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.
Predicted Secondary structure																		.	.																									.	.											.	.	.	.															.
Query SS confidence																		.	.																									.	.											.	.	.	.															.
Query Sequence		T	G	L	E	D	Y	I	G	W	L	G	N	N	F	D	P	.	.	S	I	S	W	K	D	L	E	W	I	R	D	F	W	D	G	P	M	V	I	K	G	I	L	.	.	D	P	E	D	A	R	D	A	V	R	.	.	.	.	F	G	A	D	G	I	V	V	S	N	H	G	G	R	.	Q	L	D	G	V	L	S
Query Conservation																		.	.																									.	.											.	.	.	.															.
Alig confidence																		.	.																									.	.											.	.	.	.															.
Template Conservation
Template Sequence		H	Q	C	Q	P	V	A	E	V	C	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	L	V	V	A	M	A	K	T	G	N	V	V	N	I	K	K	P	Q	F	L	S	P	S	Q	M	K	N	I	V	E	K	F	H	E	A	G	N	G	K	L	I	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V
Template Known Secondary structure												S						G	G	G	T	T																					T	T	S		G	G	G											T	T														S	S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.							.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		S	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I	A	I	L	A	D	S	G	I	R	N	G	.	.	.	.	.	.	L	D	V	V	R	M	I	A	L	G	A	D	T	V	L	L
Query Conservation																													.	.	.	.	.	.
Alig confidence													.																.	.	.	.	.	.
Template Conservation													.
Template Sequence		D	M	L	G	F	G	V	M	K	Q	T	.	C	G	N	L	P	V	I	F	D	V	T	H	S	L	G	R	R	A	Q	A	L	D	L	A	L	A	G	M	A	T	R	L	A	G	L	F	L
Template Known Secondary structure			T										.	T	T	T							T	T	T	T		S	S	G	G	G										T	T			S
Template Predicted Secondary structure													.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions