Job Description P33232 Confidence 97.31% Date Thu Jan 5 11:51:32 GMT 2012 Rank 162 Aligned Residues 115 % Identity 20% Template c3ru6C_ PDB info PDB header:lyase Chain: C: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of orotidine 5'-phosphate2 decarboxylase (pyrf) from campylobacter jejuni subsp. jejuni nctc3 11168 Resolution 1.80 Å

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.					.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.								.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.								.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	K	D	L	E	W	I	R	D	F	W	D	G	P	M	V	I	.	.	K	G	I	L	D	P	E	.	.	.	.	D	A	R	D	A	V	R	F	G	A	D	G	I	V	V	S	N	H	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.								.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.								.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	F	I	E	E	L	K	K	V	D	D	F	K	I	F	L	D	L	K	F	H	D	I	P	N	T	M	A	D	A	C	E	E	V	S	K	L	G	V	D	M	I	N	I	H	A	S	A	G	K	I	A	I	Q	E	V	M	T	R	L	S	K	F	S	K	R	P	L	V	L	A	V	S	A	L	T	S	F	D
Template Known Secondary structure																								S														T	T	T		S						G	G	G													T	T	S	S	S									S		T	T
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
																											278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	L	D	G	V	L	S	S	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I	A	I	L	A	D	S	G	I	R	.	N	G	L	D	V	V	R	M	I	A	L	G	A	D	T	V	L	L	G	R	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.									.
Template Conservation																																																			.
Template Sequence		E	E	N	F	F	S	I	Y	R	Q	K	I	E	E	A	V	I	N	F	S	K	I	S	Y	E	N	G	L	D	G	M	V	C	S	V	F	E	S	K	K	I	K	E	H	T	S	S	N	F	.	L	T	L	T	P	G	I	R	P	F	G	A	N	L	A	M	A	R	E	N	L	S	D	Y	I	V	V	G	R	P
Template Known Secondary structure										S	S																T	T								T	T	T								S		T	T	S	.						S			T	T										T	T		S
Template Predicted Secondary structure																																																			.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	Y	A	L	A	T	A	G	Q	A	G	V	A	N	L	L	N	L	I	E	K	E	M
Query Conservation
Alig confidence				.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.
Template Sequence		I	Y	.	.	.	.	.	.	K	N	E	N	P	R	A	V	C	E	K	I	L	N	K	I
Template Known Secondary structure				.	.	.	.	.	.	T	S	S
Template Predicted Secondary structure				.	.	.	.	.	.
Template SS confidence
		209	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions