Job Description P33232 Confidence 96.04% Date Thu Jan 5 11:51:32 GMT 2012 Rank 215 Aligned Residues 208 % Identity 18% Template c3nvtA_ PDB info PDB header:transferase/isomerase Chain: A: PDB Molecule:3-deoxy-d-arabino-heptulosonate 7-phosphate synthase; PDBTitle: 1.95 angstrom crystal structure of a bifunctional 3-deoxy-7-2 phosphoheptulonate synthase/chorismate mutase (aroa) from listeria3 monocytogenes egd-e Resolution 1.95 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		I	L	K	N	M	S	D	L	S	L	E	T	T	L	F	N	E	K	L	S	M	.	.	P	V	A	L	A	P	V	G	L	C	G	M	Y	A	R	R	G	E	V	Q	A	A	K	A	A	D	A	H	G	I	P	F	T	L	S	T	V	S	V	C	P	I	E	E	V	A	P	A	I	K	R	P	M	W	F	Q	L
Query Conservation																							.	.
Alig confidence																							.	.						.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	R	K	N	K	K	E	D	T	I	V	T	V	K	G	L	P	I	G	N	G	E	P	V	F	V	F	.	.	G	P	C	S	V	E	S	Y	E	Q	V	A	A	V	A	E	S	I	K	A	K	G	L	K	L	I	.	.	.	.	.	.	.	.	.	.	.	.	R	G	G	A	F	K	P	R	T	S	P	Y
Template Known Secondary structure		T	B	T	T	T			S							T	T				T	S	S	S						.	.			S	B																	T	T					.	.	.	.	.	.	.	.	.	.	.	.			B	S	S				S	S	T	T
Template Predicted Secondary structure																														.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.													150	.	.	.	.	.	.	.	.	.	160	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		Y	V	L	R	D	R	G	F	M	R	N	A	L	E	R	A	.	K	A	A	G	C	S	T	L	V	F	T	V	D	M	P	T	P	G	A	R	Y	R	D	A	H	S	G	M	S	G	P	N	A	A	M	R	R	Y	L	Q	A	V	T	H	P	Q	W	A	W	D	V	G	L	N	G	R	P	H	D	L	G	N	I
Query Conservation																		.
Alig confidence																		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	Q	G	L	G	L	E	G	L	K	I	L	K	R	V	S	D	E	Y	G	L	G	V	I	S	E	I	V	T	P	A	D	I	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S					T															T									S	G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.		.	.	.	.	.	.	260	.	.	.	.	.					.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																														.			.													.	.	.	.
Query SS confidence																																														.			.													.	.	.	.
Query Sequence		S	A	Y	L	G	K	P	T	G	L	E	D	Y	I	G	W	L	G	N	N	F	D	P	S	I	S	W	K	D	L	E	W	I	R	D	F	W	D	G	P	M	V	I	K	.	G	I	.	L	D	P	E	D	A	R	D	A	V	R	F	.	.	.	.	G	A	D	G	I	V	V	S	N	H	G	G	R	Q	L	D
Query Conservation																																														.			.													.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																											.									.			.													.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																											.
Template Sequence		.	.	.	.	.	.	.	.	.	A	L	D	Y	V	D	V	I	Q	I	G	A	R	N	M	Q	N	F	E	L	L	K	A	A	G	R	.	V	D	K	P	I	L	L	K	R	G	L	S	A	T	I	E	E	F	I	G	A	A	E	Y	I	M	S	Q	G	N	G	K	I	I	L	C	E	R	G	I	R	T	Y	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		T	T	T		S						G	G	G	T	T										T	.	S	S	S								T	T															T	T	T											B			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																											.
Template SS confidence
											198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		282	.				.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.																								.	.	.	.											.	.
Query SS confidence				.	.	.																								.	.	.	.											.	.
Query Sequence		G	V	.	.	.	L	S	S	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I	A	I	L	A	D	.	.	.	.	S	G	I	R	N	G	L	D	V	V	.	.	R	M	I	A	L	G	A	D	T	V	L	L
Query Conservation				.	.	.																								.	.	.	.											.	.
Alig confidence				.	.	.															.	.								.	.	.	.											.	.
Template Conservation																					.	.
Template Sequence		K	A	T	R	N	T	L	D	I	S	A	V	P	I	L	K	K	E	T	.	.	H	L	P	V	M	V	D	V	T	H	S	T	G	R	K	D	L	L	L	P	C	A	K	A	A	L	A	I	E	A	D	G	V	M	A
Template Known Secondary structure			S	S	S	S	B			T	T									B	.	.	S	S													G	G	G											T	T		S
Template Predicted Secondary structure																					.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions