Job Description P33232 Confidence 94.93% Date Thu Jan 5 11:51:32 GMT 2012 Rank 225 Aligned Residues 113 % Identity 26% Template c3ldvB_ PDB info PDB header:lyase Chain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.77 angstrom resolution crystal structure of orotidine 5'-2 phosphate decarboxylase from vibrio cholerae o1 biovar3 eltor str. n16961 Resolution 1.77 Å

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		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.					.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.										.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.										.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	L	E	W	I	R	D	F	W	D	G	P	M	V	.	.	I	K	G	I	L	D	P	E	D	.	.	.	.	A	R	D	A	V	R	F	G	A	D	G	I	V	V	S	N	H	G	G	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.										.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.						.	.										.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		D	F	V	R	E	L	H	K	R	.	G	F	S	V	F	L	D	L	K	F	H	D	I	P	N	T	C	S	K	A	V	K	A	A	A	E	L	G	V	W	M	V	N	V	H	A	S	G	G	E	R	M	M	A	A	S	R	E	I	L	E	P	Y	G	K	E	R	P	L	L	I	G	V	T	V	L	T	S	M	E
Template Known Secondary structure										T	.	T											S																T		S						G	G	G													G	G	G	G	G	G	S								S		T	T
Template Predicted Secondary structure											.
Template SS confidence
		45	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
																														280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	G	V	L	S	S	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I	A	I	L	A	D	S	G	I	R	N	G	L	.	.	.	.	D	V	V	R	M	I	A	L	G	A	D	T	V	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.												.	.	.	.
Template Conservation																																																				.
Template Sequence		S	A	D	L	Q	G	I	G	I	L	S	A	P	Q	D	H	V	L	R	L	A	T	L	T	K	N	A	G	L	D	G	V	V	C	S	A	Q	E	A	S	L	L	K	Q	H	L	G	R	E	F	.	K	L	V	T	P	G	I	R	P	A	Q	R	R	I	M	T	P	A	Q	A	I	A	S	G	S	D	Y	L	V
Template Known Secondary structure								T	T			S																T	T								T	T	T										T	T	S	.												T	T	S										T		S
Template Predicted Secondary structure																																																				.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	R	A	F	L	Y	A	L	A	T	A	G	Q	A	G	V	A	N	L	L	N	L	I	E	K	E	M
Query Conservation
Alig confidence								.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		I	G	R	P	I	T	.	.	.	.	.	.	Q	A	A	H	P	E	V	V	L	E	E	I	N	S	S	L
Template Known Secondary structure								.	.	.	.	.	.	T		S	S												T
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions