Job Description P33232 Confidence 98.75% Date Thu Jan 5 11:51:32 GMT 2012 Rank 95 Aligned Residues 266 % Identity 11% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		T	L	F	N	E	K	L	S	M	P	V	A	L	A	P	V	G	.	L	C	G	M	Y	A	R	R	G	E	V	Q	A	A	K	A	A	D	A	H	G	I	P	F	T	L	S	T	V	S	V	C	P	I	E	E	V	A	P	A	I	K	R	P	M	W	F	Q	L	Y	V	L	R	D	R	G	F	M	R	N	A	L
Query Conservation																			.
Alig confidence																			.																																				.	.	.
Template Conservation																																																							.	.	.
Template Sequence		Q	I	G	P	F	T	T	K	N	R	F	Y	Q	V	P	H	C	N	G	M	G	Y	R	D	P	S	A	Q	A	S	M	R	K	I	K	A	E	G	G	W	S	A	V	C	T	E	Q	V	E	I	H	A	T	.	.	.	S	D	I	A	P	F	I	E	L	R	I	W	D	D	Q	D	L	P	A	L	K	R	I	A
Template Known Secondary structure				T	T				S	S	S									S		S	S	S															T	T		S										S	G	G	.	.	.	G			T	T	S						S	S	G	G	G
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.													.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	A	K	A	A	G	C	S	T	L	V	F	T	V	.	.	.	.	.	.	.	.	.	.	.	.	D	M	P	T	P	G	A	R	Y	R	D	A	H	S	G	M	S	G	P	N	A	A	M	R	R	Y	L	Q	A	V	T	H	P	Q	W	A	W	D	V	G	L	N	G	R	P	H	D	L	G	N	I	S	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	I	H	E	G	G	G	L	A	G	I	E	L	A	H	N	G	M	N	A	P	N	Q	L	S	R	E	T	P	L	G	P	G	H	L	P	V	A	P	D	T	I	A	P	I	Q	A	R	A	M	T	K	Q	D	I	D	D	L	R	R	W	H	R	N	A	V	R	R	S	I	E	A	G	Y	D	I	V	Y	V
Template Known Secondary structure								T											G	G	G				T	T	T							S	S	S					S	S				S																													T		S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.											230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.									.	.	.	.	.	.	.	.	260				.	.	.	.	.
Predicted Secondary structure									.														.	.	.	.	.	.	.	.	.	.																.	.								.	.	.	.	.	.	.	.										.	.	.
Query SS confidence									.														.	.	.	.	.	.	.	.	.	.																.	.								.	.	.	.	.	.	.	.										.	.	.
Query Sequence		Y	L	G	K	P	T	G	.	L	E	D	Y	I	G	W	L	G	N	N	F	D	.	.	.	.	.	.	.	.	.	.	P	S	I	S	W	K	D	L	E	W	I	R	D	F	W	.	.	D	G	P	M	V	I	K	.	.	.	.	.	.	.	.	G	I	L	D	P	E	D	A	R	.	.	.	D	A	V	R	F
Query Conservation									.														.	.	.	.	.	.	.	.	.	.																.	.								.	.	.	.	.	.	.	.										.	.	.
Alig confidence									.														.	.	.	.	.	.	.	.	.	.																.	.								.	.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		Y	G	A	H	G	Y	S	G	V	H	H	F	L	S	K	R	Y	N	Q	R	T	D	E	Y	G	G	S	L	E	N	R	M	R	L	L	R	E	L	L	E	D	T	L	D	E	C	A	G	R	A	A	V	A	C	R	I	T	V	E	E	E	I	D	G	G	I	T	R	E	D	I	E	G	V	L	R	E	L	G	E
Template Known Secondary structure					T	T		S								T	T	T					S	T	T	S	S	S					T															S	S	S	S								S				S	T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.							.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																																														.
Query SS confidence														.	.	.	.	.	.																																														.
Query Sequence		G	A	D	G	I	V	V	S	N	H	G	G	.	.	.	.	.	.	R	Q	L	D	G	V	L	S	S	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I	A	I	L	A	D	S	G	I	R	N	G	L	D	V	V	R	M	I	A	L	G	.	A	D	T	V	L	L	G	R	A	F	L
Query Conservation														.	.	.	.	.	.																																														.
Alig confidence														.	.	.	.	.	.																					.	.																								.
Template Conservation																																								.	.
Template Sequence		L	P	D	L	W	D	F	A	M	G	S	W	E	G	D	S	V	T	S	R	F	A	P	E	G	R	Q	E	E	F	V	A	G	L	K	K	L	T	.	.	T	K	P	V	V	G	V	G	R	F	T	S	P	D	A	M	V	R	Q	I	K	A	G	I	L	D	L	I	G	A	A	R	P	S	I
Template Known Secondary structure		S	S	S							S	S					S			T	T	T			T	T	T	T					T	T	T	G	G	G		.	.	S	S						S														T	T	S		S					S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions