Return to main results Retrieve Phyre Job Id

Job DescriptionP33232
Confidence93.26%DateThu Jan 5 11:51:32 GMT 2012
Rank243Aligned Residues94
% Identity21%Templatec3fa4D_
PDB info PDB header:lyaseChain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form
Resolution2.18 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250.........260.........270....... ..280.........290....... ..300......
Predicted Secondary structure 















.....








...



Query SS confidence 










































. . . . .



















. . .








Query Sequence  KDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGG. . . . . RQLDGVLSSARALPAIADAV. . . KGDIAILAD
Query Conservation    
  

     






   


  
   


 
 





.....
 

    
   
  
  

...   
 

 
Alig confidence 










































.....



















...








Template Conservation    

  
      
  
   
  

 
 
 


 

  

   
 
  
 

    
  
       
  
    




Template Sequence  TSLRRALENPDSFIVAPGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIAD
Template Known Secondary structure  STT


STTT
S

TSS
SSS


STTS
Template Predicted Secondary structure 




























Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   307..310.. .......320........
Predicted Secondary structure 




......



Query SS confidence 





. . . . . .















Query Sequence  SGIRNG. . . . . . LDVVRMIALGADTVLL
Query Conservation 



 
...... 

 






 

 
Alig confidence 





......















Template Conservation   
 


    
  

     





 
Template Sequence  ADTGYGGPIMVARTTEQYSRSGVAAFHI
Template Known Secondary structure 
TT
SSSTT

Template Predicted Secondary structure 










Template SS confidence 



























   88.90.........100.........110.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions