Job Description P33232 Confidence 99.92% Date Thu Jan 5 11:51:32 GMT 2012 Rank 48 Aligned Residues 228 % Identity 20% Template c3bw2A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-nitropropane dioxygenase; PDBTitle: crystal structures and site-directed mutagenesis study of nitroalkane2 oxidase from streptomyces ansochromogenes Resolution 2.10 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.							.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		L	S	M	P	V	A	L	A	P	V	G	L	C	G	M	Y	A	R	R	G	E	V	Q	A	A	K	A	A	D	A	H	G	I	P	F	T	L	S	T	V	S	V	C	P	.	.	.	.	.	.	I	E	E	V	A	P	A	I	K	R	P	M	W	F	Q	L	Y	V	L	R	D	R	G	F	M	R	N	A	L	E
Query Conservation																																														.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																								.	.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		F	P	L	P	I	V	Q	A	P	M	A	G	G	V	S	V	.	.	.	.	.	P	Q	L	A	A	A	V	C	E	A	G	G	L	G	F	L	A	A	G	Y	K	T	A	D	G	M	Y	Q	E	I	K	R	L	R	G	L	T	G	R	P	F	G	V	N	V	F	M	P	Q	P	E	L	G	A	V	E	V	Y	A
Template Known Secondary structure		S	S	S	S							T	T	T	T	S		.	.	.	.	.										T	T	S	B						T	T	S																		S
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	K	A	A	G	C	S	T	L	V	F	T	V	D	M	P	T	P	G	A	R	Y	R	D	A	H	S	G	M	S	G	P	N	A	A	M	R	R	Y	L	Q	A	V	T	H	P	Q	W	A	W	D	V	G	L	N	G	R	P	H	D	L	G	N	I	S	A	Y	L	G	K	P	T	G	L	E	D	Y	I	G
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	Q	L	A	G	E	A	A	W	Y	E	T	E	L	G	D	P	D	G	G	R	D	D	G	Y	D	A	K	L	A	V	L	L	D	D	P	V	P	V	V	S	F	H	F	G	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T							T	T						S		S		S	S	T	T											S			S						S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280												.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	G	N	N	F	D	P	S	I	S	W	K	D	L	E	W	I	R	D	F	W	D	G	P	M	V	I	K	G	I	L	D	P	E	D	A	R	D	A	V	R	F	G	A	D	G	I	V	V	S	N	H	G	G	R	Q	L	.	.	.	.	.	.	.	.	.	.	.	D	G	V	L	S	S	A	R	A	L	P
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.												.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	D	R	E	V	I	A	R	L	R	R	A	.	.	G	T	L	T	L	V	T	A	T	T	P	E	E	A	R	A	V	E	A	A	G	A	D	A	V	I	A	Q	G	V	E	A	G	G	H	Q	G	T	H	R	D	S	S	E	D	D	G	A	G	I	G	L	L	S	L	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.											T	.	.	T								S	S										T	T		S							T	T		S						S	S			G	G	G	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
												134	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	D	A	V	K	G	D	I	A	I	L	A	D	S	G	I	R	N	G	L	D	V	V	R	M	I	A	L	G	A	D	T	V	L	L	G	R	A	F	L	Y	A	L	A	T	A	G	Q	A	G	V	A	N	L	L
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		Q	V	R	E	A	V	.	.	D	I	P	V	V	A	A	G	G	I	M	R	G	G	Q	I	A	A	V	L	A	A	G	A	D	A	A	Q	L	G	T	A	F	L	A	T	D	E	S	G	A	P	G	P	H	K	R	A	L
Template Known Secondary structure								.	.	S	S						S	S			S										T	T		S					S					T	S	T	T											T
Template Predicted Secondary structure								.	.
Template SS confidence
		202	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions