Job Description P33232 Confidence 34.61% Date Thu Jan 5 11:51:32 GMT 2012 Rank 412 Aligned Residues 174 % Identity 14% Template c2zc8B_ PDB info PDB header:metal binding protein Chain: B: PDB Molecule:n-acylamino acid racemase; PDBTitle: crystal structure of n-acylamino acid racemase from thermus2 thermophilus hb8 Resolution 1.95 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	W	F	Q	L	Y	V	L	R	D	R	G	F	M	R	N	A	L	E	R	A	K	A	A	G	C	S	T	L	V	F	T	V	D	M	P	T	P	G	A	R	Y	R	D	A	H	S	G	M	S	G	P	N	A	A	M	R	R	Y	L	Q	A	V	T	H	P	Q	W	A	W	D	V	G	L	N	G	R	P	H
Query Conservation
Alig confidence																																																				.	.																						.
Template Conservation																																																				.	.																						.
Template Sequence		E	V	G	V	S	L	G	I	Q	P	S	V	E	D	T	L	R	V	V	E	R	H	L	E	E	G	Y	R	R	I	K	L	K	I	K	P	G	W	D	Y	E	V	L	K	A	V	R	E	A	F	.	.	P	E	A	T	L	T	A	D	A	N	S	A	Y	S	L	A	N	L	A	Q	L	.	K	R	L	D	E	L
Template Known Secondary structure			B								S	S														T	T		S							B	T	T	B	S												.	.	T	T	S							T	T				G	G	G					.			G	G	G	G
Template Predicted Secondary structure																																																				.	.																						.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																																			.																.
Query SS confidence																																																			.																.
Query Sequence		D	L	G	N	I	S	A	Y	L	G	K	P	T	G	L	E	D	Y	I	G	W	L	G	N	N	F	D	P	S	I	S	W	K	D	L	E	W	I	R	D	F	W	D	G	P	M	V	I	K	.	G	I	L	D	P	E	D	A	R	D	A	V	R	F	G	.	A	D	G	I	V	V	S	N	H	G	G	R	Q	L
Query Conservation																																																			.																.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																.								.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Template Sequence		R	L	D	Y	I	E	Q	P	L	A	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	L	D	H	A	K	L	Q	R	E	L	S	T	P	I	C	L	D	E	S	L	T	G	A	E	K	A	R	K	A	I	E	L	G	A	G	R	V	F	N	V	K	.	.	.	.	.	.	P
Template Known Secondary structure		T		S						S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S											S	S					S	T	T			S											T			S						.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.																			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.							.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	V	L	S	S	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I	A	I	L	A	D	S	G	I	R	N	G	L	D	V	V	R	M	I	A	L	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	L	G	G	H	G	E	S	L	R	V	H	A	L	A	E	S	A	G	I	P	L	W	M	G	G	M	L	E	A	G	V	G	R	A	H	N	L	H	L	A	T
Template Known Secondary structure					T	S														T	T																						T	T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions