|   |
124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | W | F | Q | L | Y | V | L | R | D | R | G | F | M | R | N | A | L | E | R | A | K | A | A | G | C | S | T | L | V | F | T | V | D | M | P | T | P | G | A | R | Y | R | D | A | H | S | G | M | S | G | P | N | A | A | M | R | R | Y | L | Q | A | V | T | H | P | Q | W | A | W | D | V | G | L | N | G | R | P | H | D |
Query Conservation |   |
  |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|
|
|   |   |
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|
|
|
Template Sequence |   |
R | L | L | P | L | L | T | V | R | G | G | E | D | L | L | G | L | A | R | V | L | E | E | E | G | V | G | A | L | E | I | T | L | R | T | E | K | G | L | E | A | L | K | A | L | R | K | . |
. |
. |
. |
. |
. |
S | G | L | L | L | G | A | G | T | V | R | S | P | K | E | A | E | A | A | L | E | A | G | A | A | F | L |
Template Known Secondary structure |   |
T |  |  |  |  |  |
|
|
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | S | S |
|  |  |  |  |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
  |   |
204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | N | I | S | A | Y | L | G | K | P | T | G | L | E | D | Y | I | G | W | L | G | N | N | F | D | P | S | I | S | W | K | D | L | E | W | I | R | D | F | W | D | G | P | M | V | I | K | G | I | L | D | P | E | D | A | R | D | A | V | R | F | G | A | D | G | I | V | V | S | N | H | G | G | R | Q | L | D | G | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |
|
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
| . |
|
|   |
|   |
|
|   |   |   |
|   |   |   |
|
|
|   |
|
|   |
| . | . | . | . | . | . |
|
|   |   |
Template Sequence |   |
V | S | P | G | L | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | E | V | A | A | L | A | Q | A | R | G | V | P | Y | L | P | . |
G | V | L | T | P | T | E | V | E | R | A | L | A | L | G | L | S | A | L | K | F | F | . |
. |
. |
. |
. |
. |
P | A | E | P |
Template Known Secondary structure |   |
 |  | S | S |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  | . |  |  |
| S |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| . | . | . | . | . | . | S | T | T | T |
Template Predicted Secondary structure |   |
 |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
|
|
|
. | . | . | . |
  |
  |   |
284 | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | S | S | A | R | A | L | P | A | I | A | D | A | V | K | G | D | I | A | I | L | A | D | S | G | I | R | N | G | L | D | V | V | R | M | I | A | L | G | A | D | T | V | L | L | G | R | A | F | L | Y | A | L | A | T | A | G | Q | A | G | V | A | N | L | L | N | L | I | E | K |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |
|
|   |
|
|
|
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|   |
|   |
|
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |   |   |   | . |
|   |
|
|   |   |
|
|
|
|
| . |   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|
|   |
|
| . | . | . | . |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |
Template Sequence |   |
F | Q | G | V | R | V | L | R | A | Y | A | E | V | F | . |
P | E | V | R | F | L | P | T | G | G | I | . |
K | E | E | H | L | P | H | Y | A | A | L | P | N | L | L | A | V | G | G | S | . |
. |
. |
. |
W | L | L | Q | G | N | L | E | A | V | R | A | K | V | R | A | A | K | A |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |  |  |  |
| . | T | T |
|  |  |  |  | B | S | S |
| . |
| G | G | G |  |  |  |  |  | T |
| S | S | B | S |
|  |  |  | S | . | . | . | . | G | G | G |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
150 | . | . | . | . | . | . | . | . | . | 160 | |
. | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
|
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
  |