Job Description P33232 Confidence 84.62% Date Thu Jan 5 11:51:32 GMT 2012 Rank 276 Aligned Residues 235 % Identity 16% Template c2vkzH_ PDB info PDB header:transferase Chain: H: PDB Molecule:fatty acid synthase subunit beta; PDBTitle: structure of the cerulenin-inhibited fungal fatty acid2 synthase type i multienzyme complex Resolution 4.0 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		47	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		L	R	Q	R	I	L	K	N	M	S	D	.	L	S	L	E	T	T	L	F	N	E	K	L	S	M	P	V	A	L	A	P	V	G	L	C	G	M	Y	A	R	R	G	E	V	Q	A	A	K	A	A	D	A	H	G	I	P	F	T	L	S	T	V	S	V	C	P	I	E	E	V	A	P	A	I	K	R	P	M	W
Query Conservation													.
Alig confidence													.																												.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	H	P	K	L	I	K	N	K	S	G	K	I	F	V	E	T	K	F	S	K	L	I	G	R	P	P	L	L	V	P	G	M	T	P	C	T	V	S	.	.	.	.	.	P	D	F	V	A	A	T	T	N	A	G	Y	T	I	E	L	A	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T								S	S														S	S		S											T		.	.	.	.	.										T	T							G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.						.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	L	Y	V	L	R	D	R	G	F	M	R	N	A	L	E	R	A	K	A	A	G	C	S	T	L	V	F	T	V	D	M	P	T	P	G	A	R	Y	R	D	A	H	S	G	M	S	G	P	N	A	A	M	R	R	Y	L	Q	A	V	T	H	P	Q	W	A	W	D	V	G	L	N	G	R	P	H	D	L	G
Query Conservation
Alig confidence		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	Y	F	S	A	A	G	M	T	A	A	I	D	S	V	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	E	K	G	S	T	F	G	I	N	L	I	Y	V	N	P	F	M	L	Q	W	G	I	P	L	I	K	E	L	R	S	K	G
Template Known Secondary structure		.	.	.	.	.			S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S		T	T									T	T		T	T															T	T
Template Predicted Secondary structure		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.																										640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																																					.	.	.	.																									.
Query SS confidence																																																					.	.	.	.																									.
Query Sequence		N	I	S	A	Y	L	G	K	P	T	G	L	E	D	Y	I	G	W	L	G	N	N	F	D	P	S	I	S	W	K	D	L	E	W	I	R	D	F	W	D	G	P	M	V	I	K	G	I	L	D	P	.	.	.	.	E	D	A	R	D	A	V	R	F	G	A	D	G	I	V	V	S	N	H	G	G	R	Q	L	.
Query Conservation																																																					.	.	.	.																									.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.																									.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	I	Q	F	L	T	I	G	A	G	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	E	V	A	S	E	Y	I	E	T	L	G	L	K	Y	L	G	L	K	P	G	S	I	D	A	I	S	Q	V	I	N	I	A	K	A	H	P	N	F	P	I	A	L	Q	W	T	G	G	R	G	G	G
Template Known Secondary structure			S								S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.												S			S								S														S	T	T	S									S	S		S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		674	.	.	.	.	.	680	.	.	.	.	.	.															.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
							281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.												320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	D	G	V	L	S	S	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I	A	I	L	A	D	S	G	I	R	N	G	L	D	V	V	R	M	I	.	.	.	.	.	.	.	.	.	.	.	A	L	G	A	D	T	V	L	L	G	R	A	F	L	Y	A	L	A	T	A	G	Q	A	G	V
Query Conservation		.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.
Template Sequence		H	H	S	F	E	D	A	H	T	P	M	L	Q	M	Y	S	K	I	R	R	.	.	H	P	N	I	M	L	I	F	G	S	G	F	G	S	A	D	D	T	Y	P	Y	L	T	G	E	W	S	T	K	F	D	Y	P	P	M	P	F	D	G	F	L	F	G	S	R	V	M	I	A	K	E	V	K	T	S	P	D	A
Template Known Secondary structure					S			S	S											T	T	.	.		T	T							S	S			S					T					T		G	G	G	G	G	T							S					S	G	G	G	T	T	S	T	T	S
Template Predicted Secondary structure																						.	.
Template SS confidence
		740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.			760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.
		345	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	C	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		818	.	820	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions