Job Description P33232 Confidence 89.06% Date Thu Jan 5 11:51:32 GMT 2012 Rank 267 Aligned Residues 104 % Identity 15% Template c2hmcA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: the crystal structure of dihydrodipicolinate synthase dapa from2 agrobacterium tumefaciens Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	S	I	S	W	K	D	L	E	W	I	R	D	F	W	D	G	P	M	V	I	K	G	I	L	D	P	E	D	A	R	D	A	V	R	F	G	A	D	G	I	V	V	S	N	H	G	G	R	Q	L	D	G	V	L	S	S	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I	A	I	L	A	D	S	G
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template Sequence		D	R	T	P	D	F	D	A	L	V	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	E	L	I	A	D	G	X	S	A	V	V	Y	C	G	S	X	G	D	W	P	L	L	T	D	E	Q	R	X	E	G	V	E	R	L	V	K	.	.	A	G	I	P	V	I	V	G	T	G
Template Known Secondary structure		T	S	S	B									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T							S	S	G	G	G	T	G	G	G	S															.	.	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.																			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.					.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		I	R	N	G	L	D	V	V	R	.	.	.	.	M	I	A	L	G	A	D	T	V	L	L	G	R	A	F	L	Y	A	L	A	T	A	G	Q	A	G	V	A	N	L	L	N	L	I	E	K	E
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																		.	.
Template Conservation																																.	.
Template Sequence		A	V	N	T	A	S	A	V	A	H	A	V	H	A	Q	K	V	G	A	K	G	L	X	V	I	P	R	V	L	S	.	.	R	G	S	V	I	A	A	Q	K	A	H	F	K	A	I	L	S	A
Template Known Secondary structure			S	S															T		S									S	S	.	.	S	T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions