Job Description P33232 Confidence 97.31% Date Thu Jan 5 11:51:32 GMT 2012 Rank 161 Aligned Residues 193 % Identity 11% Template c2a4aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: deoxyribose-phosphate aldolase from p. yoelii Resolution 1.84 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		L	Y	V	L	R	D	R	G	F	M	R	N	A	L	E	R	A	K	A	A	G	C	S	T	L	V	F	T	V	D	M	P	T	P	G	A	R	Y	R	D	A	H	S	G	.	.	M	S	G	P	N	A	A	M	R	R	Y	L	Q	A	V	T	H	P	Q	W	A	W	D	V	G	L	N	G	R	P	H	D	L	G
Query Conservation																																														.	.
Alig confidence																																														.	.
Template Conservation
Template Sequence		L	D	E	N	G	T	E	D	D	I	R	E	L	C	N	E	S	V	K	T	C	P	F	A	A	A	V	C	V	Y	P	K	F	V	K	F	I	N	E	K	I	K	Q	E	I	N	P	F	K	P	K	I	A	C	V	I	N	F	P	Y	G	T	D	S	M	E	K	V	L	N	D	T	E	K	A	L	D	D	G	A
Template Known Secondary structure				T	T													T	T	S	S	S	S			S						G	G	G												S	S	S			S							S	T	T	T			S																T
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.											.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																										.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	S	A	Y	L	G	K	P	T	G	L	E	D	Y	I	G	W	L	G	N	N	F	D	P	S	I	S	W	K	D	L	E	W	I	R	D	F	W	D	.	.	G	P	M	V	I	K	G	I	L	D	.	.	.	.	.	.	.	.	.	.	P	E	D	A	R	D	A	V	R	F	G	A	D	G	I	V	V	S
Query Conservation																																										.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.												.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.
Template Sequence		D	E	I	D	L	V	I	N	Y	K	K	I	I	E	N	T	D	E	G	L	K	.	.	.	.	.	.	.	.	E	A	T	K	L	T	Q	S	V	K	K	L	L	T	N	K	I	L	K	V	I	I	E	V	G	E	L	K	T	E	D	L	I	I	K	T	T	L	A	V	L	N	G	N	A	D	F	I	K	T	S
Template Known Secondary structure		S														S							.	.	.	.	.	.	.	.													T	T	T	S													S													T	T	T		S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.											.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.				.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.																									.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.																									.	.	.
Query Sequence		N	H	G	G	R	Q	L	D	G	V	L	S	S	A	R	A	L	P	A	I	A	D	A	V	.	.	.	.	.	.	.	.	.	.	K	G	D	I	A	I	L	A	D	S	G	I	R	N	G	L	D	V	V	R	M	I	A	L	.	.	.	G	A	D	T	V	L	L	G	R	A	F
Query Conservation																										.	.	.	.	.	.	.	.	.	.																									.	.	.
Alig confidence		.	.	.	.																					.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	T	G	K	V	Q	I	N	A	T	P	S	S	V	E	Y	I	I	K	A	I	K	E	Y	I	K	N	N	P	E	K	N	N	K	I	G	L	K	V	S	G	G	I	S	D	L	N	T	A	S	H	Y	I	L	L	A	R	R	F	L	F	R	I	G	S	S	S	L	V
Template Known Secondary structure		.	.	.	.		S		S	S																							G	G	G	T	T	T							S	S			S																					S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions