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Job DescriptionP33232
Confidence99.97%DateThu Jan 5 11:51:32 GMT 2012
Rank42Aligned Residues320
% Identity21%Templatec1zfjA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:inosine monophosphate dehydrogenase; PDBTitle: inosine monophosphate dehydrogenase (impdh; ec 1.1.1.205) from2 streptococcus pyogenes
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LSEVALRQ. RILKNMSDLSLETTLF. NEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPA
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Template Sequence  FDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAX. . . . . . DTVTGSKXAIAIARAGGLGVI. . HKNXSITEQAEE
Template Known Secondary structure  GGG





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   15....20.........30.........40.........50... ......60.........70.... .....80......
 
   120.........130.... .....140.........150...... ...160.........170...... ...180...
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Query Sequence  IKRPMWFQLYVLRDR. . . . . . GFMRNALERAKAAGCSTLVFTV. . . . DMPTPGARYRDAHSGMSGPN. . . . . . AAMRRYL
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Template Sequence  VRKVKRSENGVIIDPFFLTPEHKVSEAEELXQRYRISGVPIVETLANRKLVGIITNRDXRFISDYNAPISEHXTSEHLVT
Template Known Secondary structure  TTTTSSS


B
SSSBTT
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   184.....190.........200.........210.........220.........230...
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Query Sequence  QAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSIS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAG
Template Known Secondary structure  TT

TT
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TTSB
TT

B
TTS
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SSTTT
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   234.....240.... .....250.........260.........270.........280.. .......290
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Query Sequence  . . . . . . . . . . . . . . . . WKDLEWIRDFW. DGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDG. . . . . . VLSSARAL
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Template Sequence  ADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAI
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   247..250.........260.........270.........280.........290.........300.........310.........320......
 
   291........ 300.........310.........320.........330........
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Query Sequence  PAIADAVKG. DIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALAT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  YDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVXLGSXFA. . . GTDEAPGETEIYQGRKYKTYRGXGSIAAXKKNK
Template Known Secondary structure  TT
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STT
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   327..330.........340.........350.........360.........370 .........380.........390.........400...
 
   339340... ......350.........360.........370..
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Query Sequence  . . . AGQAG. . . . . . . VANLLNLIEKEMKVAMTLTGAKSISEITQ
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Template Sequence  LVPEGIEGRVAYKGAASDIVFQXLGGIRSGXGYVGAGDIQELHE
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SB


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   418.420.........430.........440.........450.........460.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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