Job Description P33232 Confidence 92.96% Date Thu Jan 5 11:51:32 GMT 2012 Rank 245 Aligned Residues 178 % Identity 17% Template c1vs1B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-deoxy-7-phosphoheptulonate synthase; PDBTitle: crystal structure of 3-deoxy-d-arabino-heptulosonate-7-2 phosphate synthase (dahp synthase) from aeropyrum pernix3 in complex with mn2+ and pep Resolution 2.30 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	R	D	R	G	F	M	R	N	A	L	E	R	A	K	A	A	G	C	S	T	L	V	F	T	V	D	M	P	T	P	G	A	R	Y	R	D	A	H	S	G	M	S	G	P	N	A	A	M	R	R	Y	L	Q	A	V	T	H	P	Q	W	A	W	D	V	G	L	N	G	R	P	H	D	L	G	N	I	S	A
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		S	V	E	S	W	E	Q	V	R	E	A	A	L	A	V	K	E	A	G	A	H	M	L	R	G	G	A	F	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	S	P	Y	S	F	Q	G	L	G	.	.	L	E	G	L	K	L	L	R	R	A	G	D	E	A	G	L	P	V	V	T
Template Known Secondary structure		B																		T		S					B	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	T	T	S					T	.	.															T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.																		.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.					.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																							.	.																									.	.												.	.	.	.
Query SS confidence																							.	.																									.	.												.	.	.	.
Query Sequence		Y	L	G	K	P	T	G	L	E	D	Y	I	G	W	L	G	N	N	F	D	P	.	.	S	I	S	W	K	D	L	E	W	I	R	D	F	W	D	G	P	M	V	I	K	G	I	L	.	.	D	P	E	D	A	R	D	A	V	R	F	.	.	.	.	G	A	D	G	I	V	V	S	N	H	G	G	R	Q	L	D
Query Conservation																							.	.																									.	.												.	.	.	.
Alig confidence																							.	.																									.	.												.	.	.	.
Template Conservation
Template Sequence		E	V	L	D	P	R	H	V	E	T	V	S	R	Y	A	D	M	L	Q	I	G	A	R	N	M	Q	N	F	P	L	L	R	E	V	G	R	S	G	K	P	V	L	L	K	R	G	F	G	N	T	V	E	E	L	L	A	A	A	E	Y	I	L	L	E	G	N	W	Q	V	V	L	V	E	R	G	I	R	T	F	E
Template Known Secondary structure						G	G	G									S						G	G	G	T	T																					T	T																T	T											B			S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		282	.	.	.	.				.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.																					.	.	.	.									.	.
Query SS confidence							.	.	.																					.	.	.	.									.	.
Query Sequence		G	V	L	S	S	.	.	.	A	R	A	L	P	A	I	A	D	A	V	K	G	D	I	A	I	L	A	D	.	.	.	.	S	G	I	R	N	G	L	D	.	.	V	V	R	M	I	A	L	G	A	D	T	V	L	L
Query Conservation							.	.	.																					.	.	.	.									.	.
Alig confidence							.	.	.												.	.								.	.	.	.									.	.
Template Conservation																					.	.
Template Sequence		P	S	T	R	F	T	L	D	V	A	A	V	A	V	L	K	E	A	T	.	.	H	L	P	V	I	V	D	P	S	H	P	A	G	R	R	S	L	V	P	A	L	A	K	A	G	L	A	A	G	A	D	G	L	I	V
Template Known Secondary structure			S	S	S	S	B													B	.	.	S	S												S	G	G	G											T	T		S
Template Predicted Secondary structure																					.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions