Return to main results Retrieve Phyre Job Id

Job DescriptionP33232
Confidence80.93%DateThu Jan 5 11:51:32 GMT 2012
Rank288Aligned Residues78
% Identity29%Templatec1keeH_
PDB info PDB header:ligaseChain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270.........280.........290.........300.........310.........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  IRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMI
Query Conservation 

     






   


  
   


 
 






 

    
   
  
  

   
 

 




 
 

 


Alig confidence 











































....

















...
.





.

Template Conservation 

 
   
  
 


     
 
    






 




    ....  
  

  
   




...
.





.
 
Template Sequence  LRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCD. . . . YAITAIQKFLETDIPVFG. . . I. LGHQLL. AL
Template Known Secondary structure  TT
TT

TT

S


SB
STT
....TTS


...
.
.
Template Predicted Secondary structure 
















....



.....
Template SS confidence 















































































   206...210.........220.........230.........240......... 250.........260....... . .270.... ..
 
   320......
Predicted Secondary structure 



Query SS confidence 






Query Sequence  ALGADTV
Query Conservation 



 

Alig confidence 






Template Conservation 



 
 
Template Sequence  ASGAKTV
Template Known Secondary structure  T

Template Predicted Secondary structure 


Template SS confidence 






   278.280....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions