Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADI0
Confidence85.23%DateWed Jan 25 15:20:28 GMT 2012
Rank276Aligned Residues50
% Identity14%Templatec3ivpD_
PDB info PDB header:dna binding proteinChain: D: PDB Molecule:putative transposon-related dna-binding protein; PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630.
Resolution2.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   147..150.........160..... ....170.........180.........190......
Predicted Secondary structure 






.










Query SS confidence 


















.






























Query Sequence  GRPPVLNEEQKQVVFERIK. SGVSISAIAREFKTSRQTILRAKAKLQTPDI
Query Conservation               
  
  . 
 
   

  

 
 


 
  
       
Alig confidence 


















.






























Template Conservation       
   

  

  
   



 


   


   

  
 
   

 
Template Sequence  KEDKYDFRALGLAIKEARKKQGLTREQVGAXIEIDPRYLTNIENKGQHPSL
Template Known Secondary structure  GGG



TT

TS
S




Template Predicted Secondary structure 



















Template SS confidence 


















































   4.....10.........20.........30.........40.........50....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions