Job Description P0ADI0 Confidence 99.84% Date Wed Jan 25 15:20:28 GMT 2012 Rank 11 Aligned Residues 126 % Identity 26% Template c3bvpB_ PDB info PDB header:recombination Chain: B: PDB Molecule:tp901-1 integrase; PDBTitle: crystal structure of the n-terminal catalytic domain of tp901-12 integrase Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																												.	.
Query SS confidence																																					.																												.	.
Query Sequence		S	R	I	F	A	Y	C	R	I	S	T	L	D	Q	T	T	E	N	Q	R	R	E	I	E	S	A	G	F	K	I	K	P	Q	Q	I	.	I	E	E	H	I	S	G	S	A	A	T	S	E	R	P	G	F	N	R	L	L	A	R	L	K	C	G	.	.	D	Q	L	I	V	T	K	L	D	R	L	G	C	N	A
Query Conservation																																					.																												.	.
Alig confidence														.																							.																												.	.
Template Conservation														.
Template Sequence		K	K	V	A	I	Y	T	R	V	S	T	G	.	F	S	I	D	E	Q	I	D	R	L	T	K	Y	A	E	A	M	G	W	Q	V	S	D	T	Y	T	D	A	G	F	S	G	A	K	L	E	R	P	A	M	Q	R	L	I	N	D	I	E	N	K	A	F	D	T	V	L	V	Y	K	L	D	R	L	S	R	S	V
Template Known Secondary structure														.																		T											T			S	S	S	S												G	G	G	T			S					S	S						S
Template Predicted Secondary structure														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	I	R	K	T	V	E	Q	L	T	E	T	G	I	R	V	H	C	L	A	L	G	G	I	D	L	T	S	P	T	G	K	M	M	M	Q	V	I	S	A	V	A	E	F	E	R	D	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	T	L	Y	L	V	K	D	V	F	T	K	N	K	I	D	F	I	S	L	N	E	S	I	D	T	S	S	A	M	G	S	L	F	L	T	I	L	S	A	I	N	E	F	E	R	E	L	E
Template Known Secondary structure											T	T	G	G	G	T						T	T	T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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