Job Description P0ADI0 Confidence 95.90% Date Wed Jan 25 15:20:28 GMT 2012 Rank 46 Aligned Residues 68 % Identity 6% Template c1h0mD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:transcriptional activator protein trar; PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna Resolution 3.0 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	D	L	L	L	E	R	T	H	S	G	I	V	R	A	R	G	A	G	K	R	F	G	R	P	P	V	L	N	E	E	Q	K	Q	V	V	F	E	R	I	K	S	G	V	S	I	S	A	I	A	R	E	F	K	T	S	R	Q	T	I	L	R	A	K	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	A	A	A	A	T	I	G	Q	I	H	A	R	I	S	F	L	R	T	T	P	T	A	E	D	A	A	W	L	D	P	K	E	A	T	Y	L	R	W	I	A	V	G	K	T	X	E	E	I	A	D	V	E	G	V	K	Y	N	S	V	R	V	K	L	R	E	A
Template Known Secondary structure																		T	T	T				S		B																	T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions