 |
Job Description | P30137 | Confidence | 94.32% | Date | Thu Jan 5 11:45:54 GMT 2012 |
Rank | 230 | Aligned Residues | 82 |
% Identity | 16% | Template | d7reqa2 |
SCOP info | Flavodoxin-like
| Cobalamin (vitamin B12)-binding domain
| Cobalamin (vitamin B12)-binding domain
|
Resolution | 2.20 |
|
 |
  |   |
111 | . | . | . | |
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | M | E | . |
I | D | V | A | L | A | A | R | P | S | Y | I | A | L | G | H | V | F | P | T | Q | T | K | Q | M | P | S | A | P | Q | G | L | E | Q | L | A | R | H | V | E | R | L | . |
. |
A | D | Y | P | T | V | A | I | G | G | I | S | L | A | R | A | P | A | V | I | A | T | G | V | G | S | I | A | V | V | S |
Query Conservation |   |
  |   |   |
| . |   |   |   |
|   |   |   |
|
|
|
|
|   |   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   | . | . |   |   |   |
|
|   |
|
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |
|
|   |
|
|
|
|   |
|
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
|   |
|   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |
| . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|
|   |   | . | . | . | . |
Template Sequence |   |
T | P | E | E | T | A | R | Q | A | V | E | A | D | V | H | V | V | G | V | . |
. |
. |
. |
. |
. |
. |
S | S | L | A | G | G | H | L | T | L | V | P | A | L | R | K | E | L | D | K | L | G | R | P | D | I | L | I | T | V | G | G | V | I | P | E | Q | D | F | D | E | L | R | K | D | G | A | V | E | I | . |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  | . | . | . | . | . | . | . |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | S |  |  |  |  |  |  | S |
|
| G | G | G |  |  |  |  |  |  |  | T |  |  |  |  | . | . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
636 | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | |
|
|
|
  |
  |   |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | T | Q | A | A | D | W | R | L | A | T | A | Q | L | L | E |
Query Conservation |   |
|
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
. |
Y | T | P | G | T | V | I | P | E | S | A | I | S | L | V | K |
Template Known Secondary structure |   |
. |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
705 | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|