Job Description P30137 Confidence 90.72% Date Thu Jan 5 11:45:54 GMT 2012 Rank 273 Aligned Residues 187 % Identity 7% Template d1ykwa1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.00

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.												.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																											.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	S	V	Q	W	I	E	R	L	L	D	A	G	V	R	T	L	Q	L	R	I	K	D	R	R	.	.	.	.	.	.	D	E	E	V	E	A	D	V	V	A	A	I	A	L	G	R	R	Y	N	A	R	L	F	.	.	.	.	.	.	.	.	.	.	.	I	N	D	Y	W	R	L	A	I	K	H	Q	A	Y	G
Query Conservation																											.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	A	E	I	A	Y	Q	S	W	L	G	G	L	D	I	A	K	D	D	E	M	L	A	D	V	T	W	S	S	I	E	E	R	A	A	H	L	G	K	A	R	R	K	A	E	A	E	T	G	E	P	K	I	Y	L	A	N	I	T	D	E	V	D	S	L	M	E	K	H	D	V	A	V	R	N	G	A	N	A
Template Known Secondary structure													T	T		S						T	T		S	S	B	T	T	B																					S	S												G	G	G												T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		V	H	L	G	Q	E	D	L	Q	A	T	D	L	N	A	I	R	A	A	G	L	R	L	G	V	S	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	M	E	I	D	V	A	L	A	.	A	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence																							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																							.
Template Sequence		L	L	I	N	A	L	P	V	G	L	S	A	V	R	M	L	S	N	Y	T	Q	.	V	P	L	I	G	H	F	P	F	I	A	S	F	S	R	M	E	K	Y	G	I	H	S	K	V	M	T	K	L	Q	R	L	A	G	L	D	A	V	I	M	P	G	F	G	D	R	V	M	T	P	E	E	E	V	L	E	N	V
Template Known Secondary structure																						S	.	S							T	T	T						S	T	T	S	S														T		S							S	S	T	T	S	S	S
Template Predicted Secondary structure																							.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																		.		.	.																.
Query SS confidence																																		.		.	.																.
Query Sequence		E	Q	L	A	R	H	V	E	R	L	A	D	Y	P	T	V	A	I	G	G	I	S	L	A	R	A	P	A	V	I	A	T	.	G	.	.	V	G	S	I	A	V	V	S	A	I	T	Q	A	A	D	.	W	R	L	A	T	A	Q	L	L	E	I	A	G
Query Conservation																																		.		.	.																.
Alig confidence																																		.		.	.																.
Template Conservation
Template Sequence		I	E	C	T	K	P	M	G	R	I	K	P	C	L	P	V	P	G	G	S	D	S	A	L	T	L	Q	T	V	Y	E	K	V	G	N	V	D	F	G	F	V	P	G	R	G	V	F	G	H	P	M	G	P	K	A	G	A	K	S	I	R	Q	A	W	E
Template Known Secondary structure						S			T	T											S	B		T	T	T										S	S		S				B	S	S	S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions