|   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
. | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  | . |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
P | F | R | S | G | L | Y | P | V | V | D | S | V | Q | W | I | E | R | L | L | D | A | G | V | R | T | . |
. |
L | Q | L | R | I | K | D | R | R | D | E | E | V | E | A | D | . |
. |
. |
. |
. |
V | V | A | A | I | A | L | G | R | R | Y | N | A | R | L | F | I | N | D | Y | W | R | L | . |
A | I | K | H | Q | A | Y |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |
|
|   |   | . | . |
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |   | . | . | . | . | . |
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   | . |
|   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |
|   |   |   |
|   |
Template Sequence |   |
R | L | L | V | G | T | G | K | Y | K | D | L | D | E | T | R | R | A | I | E | A | S | G | A | E | I | V | T | V | A | V | R | R | T | N | I | P | P | D | R | Y | T | I | L | P | N | T | A | G | C | Y | D | A | V | E | A | V | R | T | C | R | L | A | R | E | L | L | D | G | H | N | L | V | K | L | E | V | L | A | D |
Template Known Secondary structure |   |
|  |  |  |
|
| S |
| S | S | S |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  | G | G | G |
|
|
|
| T | T | T | S |  |  |  |  |  |
| T | T |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S |
|
|  |  |  |  |
|
| B | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1021 | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | H | L | G | Q | E | D | L | Q | A | T | D | L | N | A | I | R | A | A | G | . |
. |
L | R | L | G | V | S | T | H | D | D | M | E | I | D | V | A | L | A | A | R | P | S | Y | I | A | L | G | H | V | F | P | T | Q | T | K | Q | M | P | S | A | P | Q | G | L | E | Q | L | A | R | H | V | E | R | L | A | D | Y |
Query Conservation |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|   |   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|   |
|   |
|   |   |
|
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|   |   |   | . |   |   |
|
Template Sequence |   |
Q | K | T | L | F | P | N | V | V | E | T | L | K | A | A | E | Q | L | V | K | D | G | F | D | V | M | V | Y | T | S | D | D | P | I | I | A | R | Q | L | A | E | I | G | C | I | A | V | M | P | L | A | G | L | I | G | S | G | L | . |
. |
. |
. |
G | I | C | N | P | Y | N | L | R | I | I | L | E | E | . |
A | K | V |
Template Known Secondary structure |   |
T | T | T |
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |
| S | S | S | T | T |
|
|
| . | . | . | . |
|
| S |
|  |  |  |  |  |  |  |  |  |  | . |
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1114 | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | |
|
|
|
. | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | |
. | . | . |
  |
  |   |
160 | . | . | . | . | . | . | . | |
. | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | T | V | A | I | G | G | I | . |
S | L | A | R | A | P | A | V | I | A | T | G | V | G | S | I | A | V | V | S | A | I | T | Q | A | A | D | W | R | L | A | T | A | Q | L | L | E | I | A | G | V | G |
Query Conservation |   |
|
|   |
|
|
|
|
| . |   |   |   |
|
|   |   |
|   |   |   |
|
|   |
|
|
|
|   |
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |
|
|
|   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |
Template Sequence |   |
P | V | L | V | D | A | G | V | G | T | A | S | D | A | A | I | A | M | E | L | G | C | E | A | V | L | M | N | T | A | I | A | H | A | K | D | P | V | M | M | A | E | A | M | K | H | A | I | V | A | G |
Template Known Secondary structure |   |
| B |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  | S |  |  |  |  | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1189 | 1190 | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | . | . | . | . | . | . | . | . | 1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . |
  |