 |
Job Description | P30137 | Confidence | 66.50% | Date | Thu Jan 5 11:45:54 GMT 2012 |
Rank | 370 | Aligned Residues | 114 |
% Identity | 13% | Template | d1u1ha2 |
SCOP info | TIM beta/alpha-barrel
| UROD/MetE-like
| Cobalamin-independent methionine synthase
|
Resolution | 2.55 |
|
 |
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
. | . | . | . | . | . | |
|
|
|
|
|
|
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|  |  |  |  |
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | W | I | E | R | L | L | D | A | G | V | R | T | L | Q | L | R | I | K | D | R | R | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | E | V | E | A | D | V | V | A | A | I | A | L | G | R | R | Y | N | . |
. |
. |
A | R | L | F | I | N | . |
. |
. |
. |
. |
. |
. |
D | Y | W | R | L | A | I | K | H | Q | A | Y | G | V |
Query Conservation |   |
  |   |
|
|   |   |
|   |   |
|
|   |   |
|
|
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   | . | . | . |   |   |
|
|
|   | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |
Template Sequence |   |
D | E | V | E | D | L | E | K | G | G | I | G | V | I | Q | I | D | E | A | A | L | R | E | G | L | P | L | R | K | S | E | H | A | F | Y | L | D | W | A | V | H | S | F | R | I | T | N | C | G | V | Q | D | S | T | Q | I | H | T | H | X | C | Y | S | H | F | N | D | I | I | H | S | I | I | D | X | D | A | D | V | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
| T | T | T | T | T | T |
|
| S | S | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| T | T | S |  |  |  |  |  |  | S |
| S |
|
| T | T | T |  |  |  |  |  | T | T |
|
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
589 | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
|
. | 100 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|  |  |  |
|
|  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | L | G | Q | E | D | L | Q | A | T | D | L | N | A | I | . |
. |
. |
R | A | A | G | L | R | L | G | V | S | T | . |
. |
. |
. |
. |
. |
. |
. |
H | D | D | M | E | I | D | V | A | L | A | A | R | P | S | Y | I | A | L | G | H | V | F | P | T | Q | T |
Query Conservation |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |
|
|
|   |
|   | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|   |   |   |
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|   |   |   |   |   |
|
|   |   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|
|
Template Sequence |   |
T | I | E | N | S | R | S | D | E | K | L | L | S | V | F | R | E | G | V | K | Y | G | A | G | I | G | P | G | V | Y | D | I | H | S | P | R | I | P | S | S | E | E | I | A | D | R | V | N | K | X | L | A | V | L | E | Q | N | I | L | W | V | N | P | D |
Template Known Secondary structure |   |
 |  |
|
| S | S | S |
| G | G | G | G | G | G | T | S | S | S | S |
|
|
| S |  |  |  |  |
|
| S |
| T | T | S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| T | T | T | B |
| B |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
669 | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|