Return to main results Retrieve Phyre Job Id

Job DescriptionP30137
Confidence61.42%DateThu Jan 5 11:45:54 GMT 2012
Rank388Aligned Residues108
% Identity19%Templated1oy0a_
SCOP infoTIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Ketopantoate hydroxymethyltransferase PanB
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   90.........100. ........110.........120......... 130.........140.........150.........160.
Predicted Secondary structure 




.








.......




















Query SS confidence 











.



























. . . . . . .































Query Sequence  LQATDLNAIRAA. GLRLGVSTHDDMEIDVALAARPSYIALG. . . . . . . HVFPTQTKQMPSAPQGLEQLARHVERLADYPT
Query Conservation              .  


 
 
   
   
   




   .......
 
 
 

       
   
          

Alig confidence 











.



























.......












...















Template Conservation   
   
   
  
  
   



  

 
 
 

 
 





     

  

  

  
...
  
  

 

     
Template Sequence  IRTHHLQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDE. . . LIPLVRGVVRGAPHAL
Template Known Secondary structure 

T



STTT


TTTT

SSSSS

GGG...T
TTS
Template Predicted Secondary structure 

























...




Template SS confidence 















































































   21........30.........40.........50.........60.........70.........80. ........90.......
 
   162.. ... ..170....... ..180.........190.........200....
Predicted Secondary structure  ....


......
.







Query SS confidence 


. . . .


. . . . . .









.


























Query Sequence  VAI. . . . GGI. . . . . . SLARAPAVIA. TGVGSIAVVSAITQAADWRLATAQLLE
Query Conservation   

....


......   

  
  . 

 



 


  
 

      
  
Alig confidence 


....


......









.












....









Template Conservation 









  
   

 

 
   



 






  ....    
  
  
Template Sequence  VVADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGER. . . . VAEQIACLTA
Template Known Secondary structure 

TTSSTT
TT

SBSGG....G
Template Predicted Secondary structure 

















....
Template SS confidence 





















































   98.100.........110.........120.........130....... ..140.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions