Job Description P30137 Confidence 99.21% Date Thu Jan 5 11:45:54 GMT 2012 Rank 62 Aligned Residues 206 % Identity 15% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.											.	.	.	60	.	.	.			.
Predicted Secondary structure																																								.	.	.	.																			.	.	.	.	.	.	.	.	.	.								.	.
Query SS confidence																																								.	.	.	.																			.	.	.	.	.	.	.	.	.	.								.	.
Query Sequence		M	Y	Q	P	D	F	P	P	V	P	F	R	S	G	L	Y	P	V	V	D	S	V	Q	W	I	E	R	L	L	D	A	G	V	R	T	L	Q	L	.	.	.	.	R	I	K	D	R	R	D	E	E	V	E	A	D	V	V	A	A	I	.	.	.	.	.	.	.	.	.	.	A	L	G	R	R	Y	N	.	.	A
Query Conservation																																								.	.	.	.																			.	.	.	.	.	.	.	.	.	.								.	.
Alig confidence																																								.	.	.	.																			.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation
Template Sequence		F	Y	K	E	N	A	N	V	A	Y	T	V	L	G	Y	P	N	L	Q	T	S	E	A	F	L	Q	R	L	D	Q	S	P	I	D	I	L	E	L	G	V	A	Y	S	D	P	I	A	D	G	E	I	I	A	D	A	A	K	I	A	L	D	Q	G	V	D	I	H	S	V	F	E	L	L	A	R	I	K	T	K	K
Template Known Secondary structure		S		S	S	S								T	T	S	S											T	G	G	G	S	S		S								S	S					S	S													T	T												T				S	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		65	.	.	.	.													70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		R	L	F	I	N	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	W	R	L	A	I	K	H	Q	A	Y	G	V	H	L	G	.	.	.	.	Q	E	D	L	Q	A	T	D	L	N	A	I	R	A	A	G	L	R	L	G	V	S	T	H	D	D	M	E	I	D	V	A	L	A	A	R	P	S	Y	I	A	L
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		A	L	V	F	X	V	Y	Y	N	L	I	F	S	Y	G	L	E	K	F	V	K	K	A	K	S	L	G	I	C	A	L	I	V	P	E	L	S	F	E	E	S	D	D	L	I	K	E	C	E	R	Y	N	I	A	L	I	T	L	V	S	V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K	G	F	I	Y
Template Known Secondary structure																											T	T							T	T			G	G	G												T									T	T	S										T	T			S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E	Q	L	A	R	H	V	E	R	L	A	D	Y	P	T	V	A	I	G	G	I	S	L	A	R	A	P	A	V	I	A	T	G	V	G	S	I	A	V	V	S	A	I	T	Q	.	.	.	A	A	D	W	R	L	A	T	A	Q	L	L	E	I
Query Conservation																																																																	.	.	.
Alig confidence																																																																	.	.	.
Template Conservation
Template Sequence		L	L	A	S	I	G	I	T	G	T	K	S	V	E	E	A	I	L	Q	D	K	V	K	E	I	R	S	F	T	N	L	P	I	F	V	G	F	G	I	Q	N	N	Q	D	V	K	R	X	R	K	V	A	D	G	V	I	V	G	T	S	I	V	K	C	F	K	Q	G	N	L	D	I	I	X	K	D	I	E	E	I
Template Known Secondary structure						S		S	S																			T	T			S						S	S			S	S							T	T	T	S	S												T	T	S	S												T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		206
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		247

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions