Job Description P30137 Confidence 91.77% Date Thu Jan 5 11:45:54 GMT 2012 Rank 265 Aligned Residues 160 % Identity 13% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.												.	.	.	.	.	.																							.	.	.	.																					.
Query SS confidence																.	.												.	.	.	.	.	.																							.	.	.	.																					.
Query Sequence		Q	W	I	E	R	L	L	D	A	G	V	R	T	L	.	.	Q	L	R	I	K	D	R	R	D	E	E	.	.	.	.	.	.	V	E	A	D	V	V	A	A	I	A	L	G	R	R	Y	N	A	R	L	F	I	N	.	.	.	.	D	Y	W	R	L	A	I	K	H	Q	A	Y	G	V	H	L	G	Q	E	D	.
Query Conservation																.	.												.	.	.	.	.	.																							.	.	.	.																					.
Alig confidence																.	.												.	.	.	.	.	.																							.	.	.	.										.											.
Template Conservation																																																																						.
Template Sequence		H	Y	V	E	V	T	R	K	L	G	I	P	Y	I	F	K	A	S	F	D	K	P	R	S	S	I	H	S	Y	R	G	V	G	L	E	E	G	L	K	I	F	E	K	V	K	A	E	F	G	I	P	V	I	T	D	V	H	E	P	H	Q	C	Q	P	V	A	E	V	.	C	D	V	I	Q	L	P	A	F	L	A
Template Known Secondary structure											T									S			T	T	S		T	T	S				S																										S											.		S						G	G	G	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																						.	.	.												.	.	.	.
Query SS confidence																						.	.	.												.	.	.	.
Query Sequence		L	Q	A	T	D	L	N	A	I	R	A	A	G	L	R	L	G	V	S	T	.	.	.	H	D	D	M	E	I	D	V	A	L	A	.	.	.	.	A	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E	Q	L	A	R	H	V	E	R	L	A	D	Y	P	T	V
Query Conservation																						.	.	.												.	.	.	.
Alig confidence																						.	.	.												.	.	.	.									.	.
Template Conservation																																																.	.
Template Sequence		R	Q	T	D	L	V	V	A	M	A	K	T	G	N	V	V	N	I	K	K	P	Q	F	L	S	P	S	Q	M	K	N	I	V	E	K	F	H	E	A	G	N	G	K	L	I	L	.	.	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	D	M	L	G	F	G	V	M	K	Q	T	C	G	N	L	P	V	I
Template Known Secondary structure		T																					T	T	S		G	G	G											T	T							.	.								S	S	S						T										T	T	T
Template Predicted Secondary structure																																																.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		163	.	.	.	.	.	.	170	.								.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.
Query Sequence		A	I	G	G	I	S	L	A	R	.	.	.	.	.	.	.	A	P	A	V	I	A	T	G	V	G	S	I	A	V
Query Conservation											.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	V	T	H	S	L	G	R	R	A	Q	A	L	D	L	A	L	A	G	M	A	T	R	L	A	G	L	F	L
Template Known Secondary structure				T	T	T	T		S	S	G	G	G										T	T			S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions