Job Description P30137 Confidence 98.78% Date Thu Jan 5 11:45:54 GMT 2012 Rank 85 Aligned Residues 184 % Identity 13% Template c3ru6C_ PDB info PDB header:lyase Chain: C: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of orotidine 5'-phosphate2 decarboxylase (pyrf) from campylobacter jejuni subsp. jejuni nctc3 11168 Resolution 1.80 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.												70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																	.	.																				.																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																				.																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	D	S	V	Q	W	I	E	R	L	L	D	A	G	.	.	V	R	T	L	Q	L	R	I	K	D	R	R	D	E	E	V	E	A	D	.	V	V	A	A	I	A	L	G	R	R	Y	N	A	R	L	F	I	N	.	.	.	.	.	.	.	.	.	.	.	D	Y	W	R	L	A	I	K	H	Q	A	Y	G	V
Query Conservation																	.	.																				.																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.					.	.	.	.	.											.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		L	S	T	K	E	E	C	L	Q	L	A	K	E	L	K	N	L	D	I	W	L	.	.	.	.	.	K	V	G	L	R	A	Y	L	R	D	G	F	K	F	I	E	E	L	K	K	V	D	D	F	K	I	F	L	D	L	K	F	H	D	I	P	N	T	M	A	D	A	C	E	E	V	S	K	L	G	V	D	M	I
Template Known Secondary structure			S	S											T	T	T	S	S				.	.	.	.	.																																		S														T	T	T		S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.							.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.																											.	.	.
Query SS confidence				.	.	.	.	.	.																											.	.	.
Query Sequence		H	L	.	.	.	.	.	.	G	Q	E	D	L	Q	A	T	D	L	N	A	I	R	A	A	G	L	R	L	G	V	S	T	H	D	.	.	.	D	M	E	I	D	V	A	L	A	A	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E	Q	L	A	R	H	V	E
Query Conservation				.	.	.	.	.	.																											.	.	.
Alig confidence				.	.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		N	I	H	A	S	A	G	K	I	A	I	Q	E	V	M	T	R	L	S	K	F	S	K	R	P	L	V	L	A	V	S	A	L	T	S	F	D	E	E	N	F	F	S	I	Y	R	Q	K	I	E	E	A	V	I	N	F	S	K	I	S	Y	E	N	G	L	D	G	M	V	C	S	V	F	E	S	K	K	I	K	E
Template Known Secondary structure					G	G	G													T	T	S	S	S									S		T	T											S	S																T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		R	L	A	D	Y	P	T	V	A	I	G	G	I	S	L	A	.	.	R	A	P	A	V	I	A	T	G	V	G	S	I	A	V	V	S	A	I	T	Q	A	A	D	W	R	L	A	T	A	Q	L	L	E	I	A
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		H	T	S	S	N	F	L	T	L	T	P	G	I	R	P	F	G	A	N	L	A	M	A	R	E	N	L	S	D	Y	I	V	V	G	R	P	I	Y	K	N	E	N	P	R	A	V	C	E	K	I	L	N	K	I
Template Known Secondary structure			S		T	T	S						S			T	T										T	T		S										T	S	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions