Job Description P30137 Confidence 93.98% Date Thu Jan 5 11:45:54 GMT 2012 Rank 235 Aligned Residues 182 % Identity 10% Template c3nwrA_ PDB info PDB header:lyase Chain: A: PDB Molecule:a rubisco-like protein; PDBTitle: crystal structure of a rubisco-like protein from burkholderia fungorum Resolution 1.50 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.										.	.	.	.	.	.	.										70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	W	I	E	R	L	L	D	A	G	V	R	T	L	Q	L	R	I	K	D	R	R	D	E	E	V	E	A	D	V	V	A	A	I	A	L	G	R	R	Y	.	.	.	.	.	.	.	.	.	N	A	R	L	F	I	N	.	.	.	.	.	.	.	.	.	D	Y	W	R	L	A	I	K	H	Q	A	Y	G	V
Query Conservation																																											.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																									.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		A	A	L	V	R	E	L	C	E	A	G	V	D	F	I	.	.	D	D	E	V	C	A	N	P	A	H	A	P	L	A	E	R	V	R	A	V	M	S	E	V	R	R	Y	R	E	R	S	G	R	P	V	M	V	A	F	N	I	T	D	D	L	D	A	M	R	R	H	A	E	L	V	E	R	E	G	G	S	C	V
Template Known Secondary structure												T		S	B		.	.			T	T		S	S		T	T	S																					S				B							S															T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.																		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	L	G	Q	E	D	L	Q	A	T	D	L	N	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	A	G	L	R	L	G	V	S	T	H	D	D	M	E	I	D	V	A	L	A	A	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.				.
Template Conservation																																												.				.
Template Sequence		M	A	S	I	N	W	C	G	F	S	A	I	Q	S	L	R	R	T	T	P	L	V	L	H	A	H	R	N	G	Y	G	M	M	S	R	D	P	A	L	G	M	S	.	F	Q	A	.	Y	Q	T	L	W	R	L	S	G	V	D	H	M	H	V	H	G	L	A	G	K	F	A	Q	S	D	A	E	V	I	E	S	A
Template Known Secondary structure																						S							T	T	T	T	T	T	T	S	S	T	T					.				.							T	B	T		S							T	T		S	S	S
Template Predicted Secondary structure																																												.				.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		147	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																									.	.						.													.
Query SS confidence									.	.																									.	.						.													.
Query Sequence		E	Q	L	A	R	H	V	.	.	E	R	L	A	D	Y	P	T	V	A	I	G	G	I	S	L	A	R	A	P	A	V	I	A	.	.	T	G	V	G	S	.	I	A	V	V	S	A	I	T	Q	A	A	D	.	W	R	L	A	T	A	Q	L	L	E	I	A	G
Query Conservation									.	.																									.	.						.													.
Alig confidence									.	.																									.	.						.													.
Template Conservation
Template Sequence		R	D	C	A	T	P	L	A	A	G	C	D	D	A	V	L	P	A	F	S	S	G	Q	W	A	G	T	V	Q	A	T	F	D	A	V	R	S	T	D	L	L	F	M	S	G	G	G	I	L	A	H	P	D	G	P	A	A	G	V	T	S	V	R	Q	A	W	A
Template Known Secondary structure						S		S	S	T	T											S	S		S	G	G	G									S	S	S		S					S					T		T	T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions