Job Description P30137 Confidence 41.73% Date Thu Jan 5 11:45:54 GMT 2012 Rank 452 Aligned Residues 144 % Identity 19% Template c3noyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: crystal structure of ispg (gcpe) Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.																.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.																.	.	.	.	.	.	.
Query Sequence		V	Q	W	I	E	R	L	L	D	A	G	V	R	T	L	Q	L	R	I	K	D	R	R	D	E	E	V	E	A	D	V	V	A	A	I	A	L	G	R	R	Y	N	A	R	L	F	I	N	D	Y	W	R	L	.	.	.	.	.	A	I	K	H	Q	A	Y	G	V	H	L	G	Q	E	D	.	.	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.																.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																										.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		L	N	Q	I	K	R	L	Y	E	A	G	C	E	I	V	R	V	A	V	P	H	K	.	.	.	.	.	.	E	D	V	E	A	L	E	E	I	V	K	K	S	P	M	P	V	I	A	D	I	H	F	A	P	S	Y	A	F	L	S	M	E	K	G	V	H	G	I	R	I	N	P	G	N	I	G	K	E	E	I	V
Template Known Secondary structure											T	T										S		.	.	.	.	.	.														S	S								S											T	T		S										S
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	A	T	D	L	N	A	I	R	A	A	G	L	R	L	G	V	S	T	H	D	D	M	E	I	D	V	A	L	A	A	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E	Q	L	A	R	H	V	E	R	L	A	D	Y	P	T	V	A	I	G	G	I	S	L
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	I	V	E	E	A	K	R	R	G	V	A	V	R	I	G	V	N	S	G	S	L	E	K	D	L	L	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	Y	P	S	A	E	A	L	A	E	S	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T									G	G	G									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.																						.	.	.	.	.	.	150	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	A	P	A	V	I	A	T	G	V	G	S	I	A	V	V	S	A	I	T	Q	A	A	D	W	R	L	A	T	A	Q	L	L	E	I	A	G	V	G	D
Query Conservation
Alig confidence																			.	.	.
Template Conservation																			.	.	.
Template Sequence		R	W	S	E	K	F	E	K	W	G	F	T	N	Y	K	V	S	.	.	.	I	K	G	S	D	V	L	Q	N	V	R	A	N	L	I	F	A	E	R	T	D
Template Known Secondary structure										T	T								.	.	.				S	S
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions