Return to main results Retrieve Phyre Job Id

Job DescriptionP30137
Confidence61.46%DateThu Jan 5 11:45:54 GMT 2012
Rank387Aligned Residues96
% Identity18%Templatec3noeA_
PDB info PDB header:lyaseChain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from pseudomonas2 aeruginosa
Resolution2.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150........ .160.... .....170........ .180....
Predicted Secondary structure 























..

.




....


Query SS confidence 














































. .





.













. . . .





Query Sequence  DMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLAD. . YPTVAI. GGISLARAPAVIAT. . . . GVGSIA
Query Conservation    
   
   




   
 
 
 

       
   
         .. 

 

.


   

  
   ....

 


Alig confidence 
















...


























..





.













....





Template Conservation     
  

  

 

  ... 




   

  

  
             

 

   
    
  
  
   


 
 
Template Sequence  AKLVDFHLQDGTNAIVA. . . VGTTGESATLDVEEHIQVVRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACL
Template Known Secondary structure  T
S...SSTTTTGGG

TTSS



SSTTT
S
Template Predicted Secondary structure 



...





















Template SS confidence 















































































   25....30.........40. ........50.........60.........70.........80.........90.........100.
 
   185....190.........200.........210
Predicted Secondary structure 







Query SS confidence 

























Query Sequence  VVSAITQAADWRLATAQLLEIAGVGD
Query Conservation 
 


  
 

      
  
     
Alig confidence 

























Template Conservation 
  
     
   
      

    
Template Sequence  LVTPYYNKPTQEGMYQHFRHIAEAVA
Template Known Secondary structure 


SS


S
Template Predicted Secondary structure 










Template SS confidence 

























   102.......110.........120.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions