Job Description P30137 Confidence 47.56% Date Thu Jan 5 11:45:54 GMT 2012 Rank 435 Aligned Residues 93 % Identity 13% Template c3n2xB_ PDB info PDB header:lyase Chain: B: PDB Molecule:uncharacterized protein yage; PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.
Predicted Secondary structure																																														.	.	.	.	.										.															.	.	.	.
Query SS confidence																																														.	.	.	.	.										.															.	.	.	.
Query Sequence		D	M	E	I	D	V	A	L	A	A	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E	Q	L	A	R	H	V	E	R	.	.	.	.	.	L	A	D	Y	P	T	V	A	I	.	G	G	I	S	L	A	R	A	P	A	V	I	A	T	.	.	.	.	G	V	G
Query Conservation																																														.	.	.	.	.										.															.	.	.	.
Alig confidence																					.	.	.	.	.	.																				.	.	.	.	.										.															.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	.	.	.	.	.	.	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D
Template Known Secondary structure											T	T		S					S	S	.	.	.	.	.	.	T	T	T	T	G	G	G	S																	T	T	S	S								S	S																T		S
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	A	V	V	S	A	I	T	Q	A	A	D	W	R	L	A	T	A	Q	L	L	E	I	A	G	V	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T
Template Known Secondary structure									S	S	S																	T		S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions