Return to main results Retrieve Phyre Job Id

Job DescriptionP30137
Confidence80.89%DateThu Jan 5 11:45:54 GMT 2012
Rank331Aligned Residues97
% Identity13%Templatec3lciA_
PDB info PDB header:lyaseChain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150...... ...160.... .....170........ .180....
Predicted Secondary structure 





















..



.




....


Query SS confidence 












































. .







.













. . . .





Query Sequence  DMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERL. . ADYPTVAI. GGISLARAPAVIAT. . . . GVGSIA
Query Conservation    
   
   




   
 
 
 

       
   
       ..   

 

.


   

  
   ....

 


Alig confidence 
















...
























..







.













....





Template Conservation     
  
   

 

  ... 




   

  

  
             

 

   
  
 
  
  
   


 
 
Template Sequence  RRLVQFNIQQGIDGLYV. . . GGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVS
Template Known Secondary structure  TT
S...SSGGGTGGGS
TTTS


SST
S
Template Predicted Secondary structure 



...





















Template SS confidence 















































































   28.30.........40.... .....50.........60.........70.........80.........90.........100....
 
   185....190.........200.........210.
Predicted Secondary structure 








Query SS confidence 


























Query Sequence  VVSAITQAADWRLATAQLLEIAGVGDE
Query Conservation 
 


  
 

      
  
      
Alig confidence 


























Template Conservation 
  
 
   
   
      
      
Template Sequence  AVTPFYYPFSFEEHCDHYRAIIDSADG
Template Known Secondary structure 


SS


TTT
Template Predicted Secondary structure 










Template SS confidence 


























   105....110.........120.........130.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions