Job Description P30137 Confidence 94.38% Date Thu Jan 5 11:45:54 GMT 2012 Rank 229 Aligned Residues 158 % Identity 14% Template c3l2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2. Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																												.	.	.	.																															.	.	.	.
Query SS confidence																																												.	.	.	.																															.	.	.	.
Query Sequence		Y	Q	P	D	F	P	P	V	P	F	R	S	G	L	Y	P	V	V	D	S	V	Q	W	I	E	R	L	L	D	A	G	V	R	T	L	Q	L	R	I	K	D	R	.	.	.	.	R	D	E	E	V	E	A	D	V	V	A	A	I	A	L	G	R	R	Y	N	A	R	L	F	I	N	D	Y	W	R	.	.	.	.
Query Conservation																																												.	.	.	.																															.	.	.	.
Alig confidence																																												.	.	.	.															.	.															.	.	.	.
Template Conservation																																																														.	.
Template Sequence		V	G	E	G	A	P	K	I	I	V	S	L	M	G	K	T	I	T	D	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	F	A	N	V	T	T	A	E	S	V	L	E	A	A	G	A	I	R	E	.	.	I	I	T	D	K	P	L	L	F	T	F	R	S	A	K	E	G	G
Template Known Secondary structure			T	S	S	S										S	S												T	T	S			S						G	G	G		T	T	T	T															.	.				S	S									G	G	G	T
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
																74	.	.	.	.	.		80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.											.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.							.								.	.	.																										.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.							.								.	.	.																										.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	I	K	H	Q	.	A	Y	G	V	H	L	G	.	.	.	Q	E	D	L	Q	A	T	D	L	N	A	I	R	A	A	G	L	R	L	G	V	S	T	H	D	.	.	.	.	.	.	.	.	.	.	D	M	E	I	D	V	A	L	A	A	R	P	S	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.							.								.	.	.																										.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.							.								.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Q	A	L	T	T	G	Q	Y	I	D	L	N	R	A	A	V	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	E	V	K	A	T	V	G	Y	A	H	Q	H	N	V	A	V	I	M	S	N	H	D	F	H	K	T	P	A	A	E	E	I	V	Q	R	L	R	K	M	Q	E	L	G	A	D	I
Template Known Secondary structure		S	S																		S			S						G	G	G															T	T										S	S																		T	T		S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E	Q	L	A	R	H	V	E	R	L	A	D	Y	P	T	V	A	I	G
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		P	K	I	.	.	.	.	A	V	M	P	Q	T	K	A	D	V	L	T	L	L	T	A	T	V	E	M	Q	E	R	Y	A	D	R	P	I	I	T	M	S
Template Known Secondary structure					.	.	.	.					S	S																		T		S	S
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		169	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions