Return to main results Retrieve Phyre Job Id

Job DescriptionP30137
Confidence97.72%DateThu Jan 5 11:45:54 GMT 2012
Rank146Aligned Residues110
% Identity14%Templatec3k30B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100...... ...110.. .......120.........130 .........140.........150.......
Predicted Secondary structure 




..

..........





..
















Query SS confidence 














. .





. . . . . . . . . .

















. .


























Query Sequence  ATDLNAIRAAGLRLG. . VSTHDD. . . . . . . . . . MEIDVALAARPSYIALGH. . VFPTQTKQMPSAPQGLEQLARHVERLA
Query Conservation              


.. 
 
  .......... 
   
   




   
.. 
 
 

       
   
        
Alig confidence 














..





..........

















..


























Template Conservation 
  

   
 
  
  
         
    
       
    
   

 
                       

   
Template Sequence  LEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLT
Template Known Secondary structure  SSSSS


STTS

TTSSS
SSS

TTT

TTTTTTTGGG
Template Predicted Secondary structure 



































Template SS confidence 















































































   214.....220.........230.........240.........250.........260.........270.........280.........290...
 
   158.160....... ..170......... 180.........190.........200.
Predicted Secondary structure 





.


.





Query SS confidence 









.











.





















Query Sequence  DYPTVAIGGI. SLARAPAVIATG. VGSIAVVSAITQAADWRLATAQ
Query Conservation    

 




.   

  
   
.
 



 


  
 

      
Alig confidence 









.











.





















Template Conservation    

   
       
   
  
  
 
   
   


    
   
Template Sequence  TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRD
Template Known Secondary structure  SS

S



TTS
SS
TT
Template Predicted Secondary structure 
















Template SS confidence 













































   294.....300.........310.........320.........330.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions