Job Description P30137 Confidence 93.59% Date Thu Jan 5 11:45:54 GMT 2012 Rank 244 Aligned Residues 155 % Identity 20% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	W	I	E	R	L	L	D	A	G	V	R	T	L	Q	L	R	I	K	D	R	R	D	E	E	V	E	A	D	V	V	A	A	I	A	L	G	R	R	Y	N	A	R	L	F	I	N	.	.	.	D	Y	W	R	L	A	I	K	H	Q	A	Y	G	V	H	L	G	Q	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																		.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.																					.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	P	V	A	S	E	Q	S	R	.	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	M	D	D	A	R	V	A	V	E	T	G	V	D	G	V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H
Template Known Secondary structure												T		S							G	G	G						.								T	S			S	S								S											T	T		S								G	G	G
Template Predicted Secondary structure																													.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
							88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.										.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	E	D	L	Q	A	T	D	L	N	A	I	R	A	A	G	L	R	L	G	V	S	T	H	D	.	.	.	.	.	.	.	.	.	D	M	E	I	D	V	A	L	A	A	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E	Q	L	A	R	H	V
Query Conservation		.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																									.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.
Template Sequence		D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A	D	.	.	.	.	.	.	T	V	G	C	A	T	P	R	Q	V	Y	D	L	I	R	T	L
Template Known Secondary structure																				T	T								T	T	G	G	G	S																		S							.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.							.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		E	R	L	A	D	Y	P	T	V	A	I	G	.	.	.	.	G	I	S	L	A	R	A	P	A	V	I	A	T	G	V	G	S	I
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		R	G	V	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	A	I	A	N	A	Y	C	A	L	E	A	G	A	T	H	I
Template Known Secondary structure						S	S							B		T	T	S													T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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